Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0207 ATGGGATCAAATGAGAATGTTTCCAAACAAAAAATGGAACATGAAAAGGTCAAATTTCCCGTTGGTATTCGATTTTATCCAACCGATGAAGAGCTCATAAGTCAATACCTTGCCAAGAAGGTAGATGACAATAGCTTTTGTGCTATGGCTATTGCTGAAGTTGATATGAATAAGTGTGAACCATGGGATTTGCCAGATATGGCTAAAATGGGAGAAACAGAATGGTATTTTTTCTGCGTGAGGGACAGAAAATACCCAACTGGTCAAAGGACAAATAGGGCTACTCATGCAGGCTATTGGAAGGCCACAGGCAAAGACAAAGAGATTTTCAATGAAAATGCATTAATTGGGATGAAGAAAACACTGGTTTTCTACATAGGAAGAGCTCCAAGAGGTGAAAAAACCAATTGGGTCATGCATGAATACAGATTGGAGGGTAACACACTCTCTCAGCACATCCTATCCACACAAGGAATGGGTGAATGGGTTCTCAGCAGAGTCTTTGAGAAGAGTAATTGTGGTAAGAAAATGCATGGTTCAAAACTTGGAAGGTTTAACTCCTCTAGAGAAGGAACACCAAATACTAATGAATCTCTATTGCCTCCATTGATGGATTCTTCTCCATGCAATAGTGAAAACAAAATCAACTTTGGTGATAATATCTCTCATGTGCTCAATTCAATTCAAATAGAGAATCACAAAACACAAGATGATAACATTGTTGGTAACAATGAAACTAGTATCTTGAACATGTCATCCTCTTCAAAACAAATTGATGTTTACCCTTTAGCTGAAGCAACAATTGTTGATTCCAACCAAACCTCAATGGTTGAGAATTCATCAAACTTTTTCTTGTCTCAAGAACAATCATTGTTGAAGATGCAGTTGGAGAATGAGAATCTTGGAACAAGTTCAAAGCAAACCCTAAACCAAGAGTTTTCTATAGGGAGAGACTTTGATGGTGATATCTCATCTGTGGTATATGGAAATGACATGCTTCAAAGGTGGTTTGGAAATCAAGAATTGTCACCAGCTTCTACTGAGCCTATGGTCACTGATTGCTTGTGGAATTTCTGA 1077 0.3798 MGSNENVSKQKMEHEKVKFPVGIRFYPTDEELISQYLAKKVDDNSFCAMAIAEVDMNKCEPWDLPDMAKMGETEWYFFCVRDRKYPTGQRTNRATHAGYWKATGKDKEIFNENALIGMKKTLVFYIGRAPRGEKTNWVMHEYRLEGNTLSQHILSTQGMGEWVLSRVFEKSNCGKKMHGSKLGRFNSSREGTPNTNESLLPPLMDSSPCNSENKINFGDNISHVLNSIQIENHKTQDDNIVGNNETSILNMSSSSKQIDVYPLAEATIVDSNQTSMVENSSNFFLSQEQSLLKMQLENENLGTSSKQTLNQEFSIGRDFDGDISSVVYGNDMLQRWFGNQELSPASTEPMVTDCLWNF* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0207 358 ProSiteProfiles NAC domain profile. 19 170 IPR003441 GO:0003677|GO:0006355
Mal3g0207 358 MobiDBLite consensus disorder prediction 179 203 - -
Mal3g0207 358 SUPERFAMILY NAC domain 15 170 IPR036093 GO:0003677|GO:0006355
Mal3g0207 358 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 355 - -
Mal3g0207 358 MobiDBLite consensus disorder prediction 185 203 - -
Mal3g0207 358 Pfam No apical meristem (NAM) protein 20 144 IPR003441 GO:0003677|GO:0006355
Mal3g0207 358 Gene3D NAC domain 28 174 IPR036093 GO:0003677|GO:0006355
Mal3g0207 358 PANTHER ANAC079/ANAC080/ATNAC4 PROTEIN 6 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0207 Mal-Chr3 7274141 7276583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0207 19 358 NAC Transcription Factor Family AT5G07680 47.214 1.35e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal3g0207 NAM 1.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0207 - - cam:101488836 498.819