Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0177 ATGGAAGGAGAAGGTGATAAGTGGCAGCAGCAGTGTGATGAAGATGTAGCTCTGAATATTCCCTTAATATCAGAACATGAAGGAAGACAAATTTCTGCTAACGGTTCCAGCAACAATGTCACCACATCTTTCCTTAAAACTTGTTTCAATGGTCTCAATGCTTTATCAGGTGTTGGGATACTATCAGTTCCATATGCATTAGCCTCAGGAGGATGGTTAAGTTTAGCACTTTTATTTTCCATTGCAGCAGCAGCATTTTACTCAGGCATACTAATGAAAAGATGCATGGAAAAAAATTCAAACATTAAAACATACCCTGACATAGGTGAACTTGCATTTGGGAAAATCGGGAGATTAATCGTATCAATATCAATGTACACAGAGCTTTACTTGCTTTCAATTGGATTCTTGATTCTTGAAGGTGACAATTTGAGTAACTTATTTCCAATTGAAGATTTTCAAGTGTTTGGTTTATCAATTAGTGCAAAGAAATTCTTTGTGATATTGGTTGCGGTTATTATTTTACCAACGGTTTGGTTGGATAATTTGAGCTTGCTTTCTTTTGTATCTGCAAGTGGTGTGTTTGCTTCTGGTGTTATTATTTTGTCAATATCATGGACTGCAACATTTGATGGAGTTGGTGTTCATCAAAAGGGTGATATTGTAAATTGGAGTGGAATTCCTACAGCTGTTAGCTTGTATGCTTTTTGTTATTGTGCACACCCTATCTTCCCTACTCTCTACAATTCCATGAAGAACAAACATCAGTTCTCTAATGTCCTAATTGTATGCTTTATATTAACCACAATTGGTTATGCATCAATGGCTATAATTGGTTACTTGATGTTTGGTTCAAAAGTTGAATCACAAGTAACATTAAATTTACCACTAGACAAAATAAGCTCAAGAATTGCAATATACACAACCTTGGTGAATCCAATATCCAAATTTGCATTGATGGCAACACCAATTACAAATGCTCTAAAAGATTTACTTCCAAGGACATACAAGAGTAATAAAGTGACCAATATCTTTGTGAGCACTGTCCTTGTAATCAGCACTGTTATTGTTGCATTGGCTGTTCCTTTCTTTGGATCTCTCATGTCATTGGTTGGAGCATTTTTAAGTGTCTCTGCTTCTATTTTGCTTCCATGTTTGTGTTACTTGAAGATTTCTGGAAGTTATAGGAAATTTGAGTTTGAGACAGTGGCAATTGTGGTACTGATAATAGTAGCTATAGCAATGGGAATATCCGGGACATATACTTCAGTTGTTGAAATAGTACAAAATTTGTAA 1296 0.3542 MEGEGDKWQQQCDEDVALNIPLISEHEGRQISANGSSNNVTTSFLKTCFNGLNALSGVGILSVPYALASGGWLSLALLFSIAAAAFYSGILMKRCMEKNSNIKTYPDIGELAFGKIGRLIVSISMYTELYLLSIGFLILEGDNLSNLFPIEDFQVFGLSISAKKFFVILVAVIILPTVWLDNLSLLSFVSASGVFASGVIILSISWTATFDGVGVHQKGDIVNWSGIPTAVSLYAFCYCAHPIFPTLYNSMKNKHQFSNVLIVCFILTTIGYASMAIIGYLMFGSKVESQVTLNLPLDKISSRIAIYTTLVNPISKFALMATPITNALKDLLPRTYKSNKVTNIFVSTVLVISTVIVALAVPFFGSLMSLVGAFLSVSASILLPCLCYLKISGSYRKFEFETVAIVVLIIVAIAMGISGTYTSVVEIVQNL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0177 431 Pfam Transmembrane amino acid transporter protein 41 421 IPR013057 -
Mal3g0177 431 PANTHER AMINO ACID TRANSPORTER AVT1J 40 428 - -
Mal3g0177 431 PANTHER OS05G0424000 PROTEIN-RELATED 40 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0177 Mal-Chr3 6587967 6601117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0177 25 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 57.426 2.11e-172 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0177 K15015 - gmx:100794374 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g0177 3 6587967 6601117 Mal3g0177 3 6587967 6601117 ECH