Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0176 ATGGTAAAGTTTCAAAGAGTGGTATTTGCAGAGGTTATAGGGACATTTTTGTTGGTGTTTGTTGGGAGTGGGGCTGCTGCTATGAATTCAATTGATGAAAACAAAGTCTCAAAATTGGGAGCTTCACTTGCAGGTGGACTCATTGTTACTGTTATGATTTATGCTATTGGACATATCTCTGGTGCACACATGAATCCGGCTGTTTCCTTAGCTTTTGCCACCGTTAAGCATTTACCTTGGAAAGAGGTCCCATTTTACATTGCAGCTCAACTCACAGGAGCAATTTCAGCTTCATATACACTTCGAGTTTTGTTAGAACCATCAAAGCAGCTAGGGGCAACATCACCTTCTGGATCACACATTCAAGCACTAATTATAGAAATTGTGACCACCTTCACCATGGTGTTCATCTCCACCGCCGTCGCCACCGACTCAAAAGCGACAGGAGAGCTCGCTGGAGTAGCAGTAGGTTCATCTGTTAGCATAGCAAGCATTGTTGCTGGACCAATATCAGGTGGGTCAATGAACCCAGCAAGGACATTAGGTCCTGCAATTGCTTCTTCATCTTACAAAGGAATTTGGGTCTATATGGTTGGACCAATTACTGGTGCACTTTTAGGTGCATGGTCTTATGTTGGTATTCAAGAGACAGATCATAAACAAGATCTTGGAACTTCACAATCTCCTCATTCAGTCAAGATACACAATGAAATGAGTGGGATTGAACTATAG 732 0.4249 MVKFQRVVFAEVIGTFLLVFVGSGAAAMNSIDENKVSKLGASLAGGLIVTVMIYAIGHISGAHMNPAVSLAFATVKHLPWKEVPFYIAAQLTGAISASYTLRVLLEPSKQLGATSPSGSHIQALIIEIVTTFTMVFISTAVATDSKATGELAGVAVGSSVSIASIVAGPISGGSMNPARTLGPAIASSSYKGIWVYMVGPITGALLGAWSYVGIQETDHKQDLGTSQSPHSVKIHNEMSGIEL* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0176 243 MobiDBLite consensus disorder prediction 220 243 - -
Mal3g0176 243 Gene3D Glycerol uptake facilitator protein. 1 225 IPR023271 -
Mal3g0176 243 TIGRFAM MIP: MIP family channel proteins 10 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g0176 243 MobiDBLite consensus disorder prediction 220 234 - -
Mal3g0176 243 PRINTS Major intrinsic protein family signature 157 179 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g0176 243 PRINTS Major intrinsic protein family signature 45 69 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g0176 243 PRINTS Major intrinsic protein family signature 194 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g0176 243 PRINTS Major intrinsic protein family signature 126 144 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g0176 243 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g0176 243 PRINTS Major intrinsic protein family signature 82 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g0176 243 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 4 220 - -
Mal3g0176 243 ProSitePatterns MIP family signature. 63 71 IPR022357 -
Mal3g0176 243 PANTHER AQUAPORIN NIP2-1 4 220 IPR034294 -
Mal3g0176 243 Pfam Major intrinsic protein 2 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal3g0176 243 SUPERFAMILY Aquaporin-like 3 220 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0176 Mal-Chr3 6508737 6513868 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0176 5 219 Major Intrinsic Protein MIP AT5G37820 49.537 8.90e-70 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0176 K09874 - gmx:100788071 330.487