Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0163 ATGACGCAAGCCCGAAAGGCGGGATTTACTATCACGATAGGTAGATCAAACGTCACAACCGGCCCTCCATATGTACAATTTAATTGTGAAAGGGGAGGTTCATATGATAAAAGAAGTGGGAAGAGTTTGAAACGCGAGGGCACCGGTTCTAGAAAATGTCATTGTCCGTTTCGGTTGAGAGGTTACATTCACCTTCCGGGCTACAATTGGTATATTATCCCCACTTGTGGAATCCACAACCACGAGATGGAGCCAAAGTTGGAAGGTCACTTACATGCCGGTAGACTCACCGGAAATTCAAAGAAGGTTGTCCAAGAATTGACAAAGAGTTTGGTGAAACCGAAACATATTTTGATTAATTTGAAACAAAAAGATGAAGAAAATGAGACAAACATAAAGCAAGTTTACAATGCTCGGCATAGATTTAGACTTGAGCAAAGAGGTAATTCCTCGGAGTTGCAACATTTGGTAAAAAAGTTGGAGGAGCACCAATATGTTCATTTCACAAGAACAAAGAGTGATGAGACAAAAGTTCTCCAAGATATTTTTTGGGCTCATCCGAAATCTATTATGTTGCTCAACACTTTTCCAACCGTGTTGATTATGGACTCCACGTATAAGACCAATAGGTATAAATTGCCTTTGTTTGAGATGGTTGGTGTGACATCCACTTACTTAACATACTCTGTTGGTTTTGCTTTTTTGGCTAATGAAAAAAAAGACAACTTCATTTGGGTTCTAGAAAAGGTGCGTGGTCTTCTTCAATCAAAGGCCAATACGCCTAAGGTGATTGTGACTGACAGAGATTCAGCTTTGATGAATGCCATAGACATTGTTTTTCCTGACACTAAGGCATTACTCTGTCAGTTACATATAAAAAAAATGTCAAACAACATTGCATCACCGATTGCAAAGTGCCGCCTATTGAGGGAAAAGAGGTGA 942 0.3981 MTQARKAGFTITIGRSNVTTGPPYVQFNCERGGSYDKRSGKSLKREGTGSRKCHCPFRLRGYIHLPGYNWYIIPTCGIHNHEMEPKLEGHLHAGRLTGNSKKVVQELTKSLVKPKHILINLKQKDEENETNIKQVYNARHRFRLEQRGNSSELQHLVKKLEEHQYVHFTRTKSDETKVLQDIFWAHPKSIMLLNTFPTVLIMDSTYKTNRYKLPLFEMVGVTSTYLTYSVGFAFLANEKKDNFIWVLEKVRGLLQSKANTPKVIVTDRDSALMNAIDIVFPDTKALLCQLHIKKMSNNIASPIAKCRLLREKR* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0163 313 Pfam MULE transposase domain 199 294 IPR018289 -
Mal3g0163 313 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 296 IPR031052 GO:0006355
Mal3g0163 313 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 42 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0163 Mal-Chr3 5926477 5927418 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g0163 MULE 4.3e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0163 - - vun:114181823 294.278