Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0153 ATGGCATTCCCACCACCTCATAGTTTCATGTTTAACACTCATGAAGATCATGAACAACTCCCTTCAACTTCTCTCAACACCTTCCTTTCTTTTCCACCTCAACACTTTCAACAAGGTCAATCTCTCAAACTTTCTTTTATCTCTTTATTGCACAATATGTTACAAGCATTAAAAAGCAGGCATTGGTGTGAAGGTGGAACAAAATGTCTAAAGAAAGAAACTGAGGGTTCTTGGAGCAATGGAAGTGATAATAGCTCAAATATTGATTTAGATCTTTCAAGAACACAAGCTTTAAACGGTCATGTTTCTTTACAGAATGGTAAAAACCTAATTAGCCTTCTACCAACTTCATTAAATAATTCTAGCAACATACCCCAACTTCTTCAATTCACTTCAAGACCAGATCTTCAAGATGAAAGCTTCAGCAACATGTTTCACAACATTAATGAGCATCAGAACCTTTGGCCTTGGCCATAG 477 0.3669 MAFPPPHSFMFNTHEDHEQLPSTSLNTFLSFPPQHFQQGQSLKLSFISLLHNMLQALKSRHWCEGGTKCLKKETEGSWSNGSDNSSNIDLDLSRTQALNGHVSLQNGKNLISLLPTSLNNSSNIPQLLQFTSRPDLQDESFSNMFHNINEHQNLWPWP* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0153 158 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 1 41 - -
Mal3g0153 158 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 49 158 IPR045224 GO:0003700
Mal3g0153 158 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 41 IPR045224 GO:0003700
Mal3g0153 158 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 49 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0153 Mal-Chr3 5581259 5584025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0153 44 157 Homeobox Transcription Factor Family AT3G01220 31.356 1.22e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0153 - K09338 gmx:100790803 106.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g0153 3 5581259 5584025 Mal3g0153 3 5581259 5584025 ECH
Mal6g3779 6 110215953 110218679 Mal3g0153 3 5581259 5584025 PCT