Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0123 ATGTCAAAAATGTCGAGTCCTAGCGGTTCAGAGATTGAAGAGAAAAGAGTTACTTCCATTATCCATGAAGTTGAAGTTGATTGCTCTACTGAACAAGAGGTTACAAAGGAAGACAAACTAAAATGTGCTAAAGAGGAGATGGGTGAGGTGAAAGAAGAAAACGAAAGGTTGAAGACGATGCTATCGCGAGTTGAAAAAGATTACAACTCGCTTCAGCTCCGTTTCTTCGACATTGTTAACAAAGAAGTTTCTATGAAAGATATAGAAGATTCATCAACGTCACACGAAGAAATCGATGAAGAACCCGAATTCGTGTCACTTTGTCTTGGAAGAAGTCCAAGTGAGTATAAGAAAGAAGCAAAAATTGAAAATTCAAACAAGCCTAAAGAAAATGATGATATGGAAGTTAACCTTAGTCTTGGATTAGACTCTAAATATGATTTGAGTCCAATGAATAGTCCAGAAGAATTACCAAAGGAAGTTGAAGTTGAAGAAAAAGGAACATTATTTTCAACAAATAAATCAACAAAAGTGATAAATGTAAATGATGAGATTTCAGAACTAATGCCTGCTAAAAGAGTCAGAGTTTCTGTAAGAGCTAAATGTGATACTCCCACGATGAATGATGGATGTCAATGGAGGAAATATGGACAAAAGATAGCAAAAGGAAATCCATGTCCAAGAGCATACTATCGTTGCACAGTTGCACCAGCATGCCCAGTTAGGAAACAGGTTCAAAGATGTGCTGATGACATGTCCATCTTAATCACAACATATGAAGGAACACACAATCACCCTCTTCAAGTAACAGCATCAGCCATGGCTTACACAACTTCAGCTGCAGCTTCAATGATGGTATCAGGTTCATCTACATCATCATCATCATCACATCAACATCAAAATGTTCATCATCACAACAATTCCACATCTTTTGGAAACTCACCAACACAACTCAATGGTCTAAATTTCAATCATCACCAATTTGATCAATCAAGAACACCAAAACAACAGTTCTTCATTCCACCAAACCATAATAATTTGTTCCCAACAATCACTCTTGACCTAACTTCTCCTTCATCCTTATCATCATCAAACATACCTTCAAATGTTCCAAGATTTTCACCAAATAATCTCAACTTTTGTTCCACACAACAACCAAATTTCACACCAACATCATCCATTTGGAACAATAACAACAAATTAGGGTTTATTAACAATAACACAATGCCTAATATTGAAAAAACTCAACTTAGGCCTTTTAATCATTTCCAAGAAAATTTCTATCAAAATCAAAATTGTGTGACCAATTACCAAACCCCTTCAAGGCAAGCATTAGCAGAAACAATTAGCAAAGCAATTAGCACTGATCCAAGTCTTCATTCAGTTATAGCTGCTGCAGTTTCATCAATTGTAGGACAAGGATCAAACAATGGTGGAAAGCAAGAAGAAACTAGAGAGAATGGTTTAGGTGGAGGGTTGAATTTGAAACTTGGTGAGTATCCTCAATTGGTTTCAAACAATTTGTTGAATCAAAATGGTAAAGGATGCTTGAAGGGATCATACTTCAAAAGATTGTCACCAACAACAAGTTCAACAGCTAAAAATTTCATGCTTCTTCAACCTTCATTGCCATTTTCTATTTCTAAGAGTAGTGCTAGTAAACCTACATCCATTGTTAATCATATCAACAATTTTGATCTAGATAAGAACACACATCATTAG 1722 0.3566 MSKMSSPSGSEIEEKRVTSIIHEVEVDCSTEQEVTKEDKLKCAKEEMGEVKEENERLKTMLSRVEKDYNSLQLRFFDIVNKEVSMKDIEDSSTSHEEIDEEPEFVSLCLGRSPSEYKKEAKIENSNKPKENDDMEVNLSLGLDSKYDLSPMNSPEELPKEVEVEEKGTLFSTNKSTKVINVNDEISELMPAKRVRVSVRAKCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCADDMSILITTYEGTHNHPLQVTASAMAYTTSAAASMMVSGSSTSSSSSHQHQNVHHHNNSTSFGNSPTQLNGLNFNHHQFDQSRTPKQQFFIPPNHNNLFPTITLDLTSPSSLSSSNIPSNVPRFSPNNLNFCSTQQPNFTPTSSIWNNNNKLGFINNNTMPNIEKTQLRPFNHFQENFYQNQNCVTNYQTPSRQALAETISKAISTDPSLHSVIAAAVSSIVGQGSNNGGKQEETRENGLGGGLNLKLGEYPQLVSNNLLNQNGKGCLKGSYFKRLSPTTSSTAKNFMLLQPSLPFSISKSSASKPTSIVNHINNFDLDKNTHH* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0123 573 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 37 556 IPR044810 GO:0003700
Mal3g0123 573 SUPERFAMILY WRKY DNA-binding domain 201 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g0123 573 Pfam WRKY DNA -binding domain 208 266 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g0123 573 SMART WRKY_cls 207 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g0123 573 MobiDBLite consensus disorder prediction 287 312 - -
Mal3g0123 573 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 37 556 - -
Mal3g0123 573 Coils Coil 40 74 - -
Mal3g0123 573 Gene3D WRKY domain 192 267 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g0123 573 ProSiteProfiles WRKY domain profile. 202 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0123 Mal-Chr3 4344722 4348363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0123 47 549 WRKY Transcription Factor Family AT5G15130 39.065 2.32e-79 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal3g0123 WRKY 3.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0123 - - mtr:MTR_7g009730 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g0123 3 4344722 4348363 Mal5g4221 5 113079024 113083393 ECH
Mal3g0123 3 4344722 4348363 Mal3g0123 3 4344722 4348363 ECH