Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0114 ATGTTGATAGAAAATGAAGTCATGTGTTTGGGAAAGAGTCAAAGGTCAATGGAAGAAAAAGAGGTAAAAGGAGCACGTTGTGTCAAGAGACAAAGAAGGGAACATGGTATTGCACCAAAAACAAGTGATGTTGGTGAAAATTCTAAAACTAACACTTCAAAGAGAAGCTCAAGATTTCGTGGTGTTAGCAGGCATAGATGGACTGGTCGATTTGAAGCTCACTTGTGGGACAAGCTTTCTTGGAACACAACACAAAAGAAGAAAGGGAAGCAAGTTTACCTTGGGGCTTATGATGAAGAAGAATCTGCTGCAAGAGCATATGATTTAGCTGCATTAAAGTATTGGGGAACATCAACTTTCACTAATTTTCCGATGTCAGATTATGAGAAAGAGATAGAGATAATGAATACTATGACCAAAGAGGAATACTTGGCCACATTAAGAAGAAAGAGCAGTGGCTTTTCAAGAGGTGTCTCAAAGTACAGGGGTGTTGCAAGGCACCATCATAATGGAAGATGGGAAGCAAGGATAGGGAGAGTTTTTGGAAACAAATATCTCTATCTTGGAACCTATAGTACACAAGAAGAAGCTGCACGTGCTTATGACATAGCTGCAATTGAGTACAGAGGAATTCATGCTGTGACCAATTTTGAATTGAGTAGCTACATAAAATGGCTAAAGCCAGAATCACAAACATTACAAAAAGAGTCTCAAAATGTGACATCTCCAAATAACTTTACTCTATTACAAGAGTCAAAGTTATTAGCCCTTCAAAAGAGTTTTTTCATTCCAAATGACCTGAATTCCACTGAAAAGCAAGAATCAACATTTGAAAGCAAAAACTATCATTTCTTGAGCAACAAGTCAACTTCTCCGACCGCGCTTAGTCTTCTCCTTCGCTCTTCGTTGTTCAAAGAATTACTCGAAAAGAATTCAAATGTATCTGAGGATGAAGTTACAAAAGAGCAACAACAAATAACTAGGGATGATGAACTAGGAGGAATCTTCTATGATGATGATATTGGAAATATCTCATTTGAGCACACAAGCACAAACAACAAACACGACACTAACACTAATTAA 1083 0.3758 MLIENEVMCLGKSQRSMEEKEVKGARCVKRQRREHGIAPKTSDVGENSKTNTSKRSSRFRGVSRHRWTGRFEAHLWDKLSWNTTQKKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPMSDYEKEIEIMNTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFELSSYIKWLKPESQTLQKESQNVTSPNNFTLLQESKLLALQKSFFIPNDLNSTEKQESTFESKNYHFLSNKSTSPTALSLLLRSSLFKELLEKNSNVSEDEVTKEQQQITRDDELGGIFYDDDIGNISFEHTSTNNKHDTNTN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0114 360 ProSiteProfiles AP2/ERF domain profile. 160 218 IPR001471 GO:0003700|GO:0006355
Mal3g0114 360 PRINTS Ethylene responsive element binding protein signature 200 220 IPR001471 GO:0003700|GO:0006355
Mal3g0114 360 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Mal3g0114 360 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 38 354 - -
Mal3g0114 360 CDD AP2 159 220 IPR001471 GO:0003700|GO:0006355
Mal3g0114 360 MobiDBLite consensus disorder prediction 21 40 - -
Mal3g0114 360 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 38 354 - -
Mal3g0114 360 SMART rav1_2 160 224 IPR001471 GO:0003700|GO:0006355
Mal3g0114 360 SMART rav1_2 58 130 IPR001471 GO:0003700|GO:0006355
Mal3g0114 360 Gene3D AP2/ERF domain 57 126 IPR036955 GO:0003700|GO:0006355
Mal3g0114 360 Gene3D AP2/ERF domain 159 220 IPR036955 GO:0003700|GO:0006355
Mal3g0114 360 SUPERFAMILY DNA-binding domain 159 219 IPR016177 GO:0003677
Mal3g0114 360 ProSiteProfiles AP2/ERF domain profile. 58 124 IPR001471 GO:0003700|GO:0006355
Mal3g0114 360 Coils Coil 305 325 - -
Mal3g0114 360 MobiDBLite consensus disorder prediction 43 57 - -
Mal3g0114 360 Pfam AP2 domain 57 116 IPR001471 GO:0003700|GO:0006355
Mal3g0114 360 Pfam AP2 domain 159 210 IPR001471 GO:0003700|GO:0006355
Mal3g0114 360 SUPERFAMILY DNA-binding domain 57 126 IPR016177 GO:0003677
Mal3g0114 360 MobiDBLite consensus disorder prediction 21 59 - -
Mal3g0114 360 CDD AP2 57 126 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0114 Mal-Chr3 4186799 4190659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0114 28 243 AP2-EREBP Transcription Factor Family AT1G72570 58.065 1.33e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mal3g0114 AP2 3.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0114 - - gmx:100792612 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g0114 3 4186799 4190659 Mal3g0114 3 4186799 4190659 ECH