Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0109 ATGGGGTTTAGGAATAATGCAATTCAAGCAGGGAGTTTGGATGTGGGAGGGAAGTCAAAGGGAAAGATGAAGAAGGATGGTGATGAGAAGGAAATTGGATGTTGTGTTAAATTTAGTTGCTTTGGAAAATGTGTACCTTCAAGGTTAAAGGTTGATACTTCCAAAAGTGGTAGCACAAGTGCTCATAATGTGGGAAAAACATCTGCATATGAGAAAAGCAAAAAGGAAAGAAGTGCTCCTCCAGGATCCTCTACAACTAGTAATGCAGAAAGCATCCCTTCCACTCCAAAGTTCAGTGAGGAATTGAATGTTTCTTCTCATTTGAGAAAATTCACATTCAATGAGCTAAAGATGGCAACTAGGAATTTCCGACCCGAAAGTCTTCTTGGTGAGGGAGGATTCGGTTGTGTCTTCAAAGGTTGGATTGAGGAGAATGGAACTGCACCTGTGAAACCAGGTACTGGACTTACCGTCGCGGTCAAGACCCTCAACCATGATGGACTTCAAGGTCACAAAGAGTGGCTTGCTGAGTTAAACATTCTCGGTGATATCGTCCACCCGAATCTGGTCAAATTGATTGGCTTCTGTATTGAAGATGATCAAAGATTATTGGTTTATCAGTTTATGCCCCGTGGAAGTTTGGAGAATCATCTTTTCAGAAAAGGGTCGTTGCCACTTCCTTGGTCTATCAGAATGAAAATTGCGCTCGGTGCAGCAAAGGGTCTTCATTTTCTTCACGAAGAAGCTCAAAGGCCAATAATATATCGTGATTTCAAGACATCTAATATTCTATTAGATGCGGAATACAATGCAAAGCTCTCTGATTTTGGACTTGCCAAAGATGGTCCTCAAGGGGAAAATACACACATATCAACGAGAGTTATGGGAACATATGGTTATGCAGCTCCTGAGTATGTGATGACTGGTCATTTGACATCAAAAAGCGACGTCTATAGTTTTGGAGTAGTACTACTTGAAATGCTCACCGGTCGGCGAGCTGTTGATAAGAATAGACCAAATGGGGAACACAACCTTGTCGAGTGGGCGAGACCTGTACTTGGAGAACGAAGATTGTTATTCCAGATAATCGACCCTCGTCTTGAAGGTCACTTCTCAGTCAAAGGGGCACAGAAAGCCGCCCAACTAGCCGCTCAATGCCTTAGCCGTGATCCGAAAGTCAGACCTATGATGAGTGAAGTTGTTCAAGCTCTAAAGCCTTTGCAAAACCTCAAGGATATGGCTATCGCGTCTTATCACTTTCAGGTAGTGCGCGTAGATCGTACAATGTCCATGCCGAATTCTAAAAACGGGACTCAAACACAGTTAGCTTCTTTATCGAAAAAGGGTCAACCTATGAGGATCTTGTCGAGTCCAAATGGTCAACACGGTTCTCCGTACCGTCATTATATCAAGTCACCAAAACCTAAAAATGGATAA 1437 0.428 MGFRNNAIQAGSLDVGGKSKGKMKKDGDEKEIGCCVKFSCFGKCVPSRLKVDTSKSGSTSAHNVGKTSAYEKSKKERSAPPGSSTTSNAESIPSTPKFSEELNVSSHLRKFTFNELKMATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNILGDIVHPNLVKLIGFCIEDDQRLLVYQFMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLHFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPQGENTHISTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRAVDKNRPNGEHNLVEWARPVLGERRLLFQIIDPRLEGHFSVKGAQKAAQLAAQCLSRDPKVRPMMSEVVQALKPLQNLKDMAIASYHFQVVRVDRTMSMPNSKNGTQTQLASLSKKGQPMRILSSPNGQHGSPYRHYIKSPKPKNG* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0109 478 PANTHER RECEPTOR-LIKE KINASE PLANT 61 469 - -
Mal3g0109 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Mal3g0109 478 ProSiteProfiles Protein kinase domain profile. 123 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0109 478 CDD STKc_IRAK 129 407 - -
Mal3g0109 478 MobiDBLite consensus disorder prediction 50 98 - -
Mal3g0109 478 MobiDBLite consensus disorder prediction 429 463 - -
Mal3g0109 478 ProSitePatterns Protein kinases ATP-binding region signature. 129 161 IPR017441 GO:0005524
Mal3g0109 478 PANTHER OS01G0588500 PROTEIN-RELATED 61 469 - -
Mal3g0109 478 MobiDBLite consensus disorder prediction 1 27 - -
Mal3g0109 478 MobiDBLite consensus disorder prediction 429 478 - -
Mal3g0109 478 Pfam Protein kinase domain 126 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0109 478 Gene3D Phosphorylase Kinase; domain 1 103 208 - -
Mal3g0109 478 Gene3D Transferase(Phosphotransferase) domain 1 209 425 - -
Mal3g0109 478 MobiDBLite consensus disorder prediction 79 98 - -
Mal3g0109 478 SUPERFAMILY Protein kinase-like (PK-like) 97 404 IPR011009 -
Mal3g0109 478 MobiDBLite consensus disorder prediction 51 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0109 Mal-Chr3 4110091 4113885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0109 87 420 Glycoside Hydrolase AT3G07070 51.445 7.96e-117 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal3g0109 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0109 - - aprc:113861691 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g3797 6 110690234 110693340 Mal3g0109 3 4110091 4113885 PCT