Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0070 ATGAGCCGTAGAGTGAAGAGGAAAGTGGCAAGAAAAGGGAAAGGGAATGTGGTGTCGAGTTTCCCGGGAATTCAAGACGAGGTTGCGGATTTGGAAGCCGGAGGAGTTGTTGATTGGAGAAGTTTACCTGATGATACAGTGCTTCAGCTATTGTCATGTTTGAGTTATCGTGATCGAGCTAGTTTATCTGCAACTTGTAAGACGTGGAGGGTTCTTGGTAACTCTCCGTGTTTGTGGAGTTCTTTGGATCTTCGTTCGCACAAGTTTGATGCCAATGTTGCATCTTCACTTGCTTCTAGATGTGTGCATCTTCAGAAGCTTAGGTTTCGTGGTGCGGAGTCTGCTGATGCATTACTTCATCTTCGAGCTAAGAACTTGCGCGAAATAAATGGTGACGGTTGCAGGAAGATGACCGATGCAACTCTTGCTGTGGTTGCAGCTCGGCATGAGTTACTTGAGAGTCTTGTGCTTGGACCAGATTTTTGTGATAAAGTCACTAGTGATGCTATAAAAGCAATAGCTCAATGCTGTCCTAATTTGATTAAACTCAGGCTCTCAGGCATTAGGGATGTGAATGCTGATGCTATTAATGCATTGGCTAACTGTTGTTCAAAGTTGACCGATATCGGGTTCATCGACTGCCTGAGTGTTGACGAGCTTGCATTGGGAAATGTGCAATCAGTTCGTTTCCTTTCTGTTGCGGGGACACCAAGTATGAAGTGGAGTGTGGTTTCACATCTTAAGCTTCCTAACCTGATTGGATTAGATGTTTCAAGAACCGATGTCGGTCCGTCTGCTGTTTCAAGATTGTTATCCTCATCACCAAATTTGAGGGTTTTGATTGCTTTGAATTGTCCTATCCTTGAAGAAGAGACTAGCTTTTCTGCTAGTAAATATAAAAACAAGTTGTTGATTTCCCTATCAACCGACATTTTTAAAGGACTAGCTTCTTTGTTTTTCGATAATACAAATAGAGGAAAGAATGTGTTTTTGGACTGGAGGACTTCAAATAGTTACAATGATAAGGGCCTTGGTGAAATTATACCTTGGCTTGAATGGATGCTATCCCATATACTTTTGCGTTCTGCTGAGAGCCCTCAACAGGGAGGTCTTGATAAATTCTGGGTTGAACAAGGTGCGTCGCTCTTGCTTAGTCTAATGCAGAGTTCTCAAGAGGATGTTCAGGAGAGGGCAGCCACAGGTCTTGCAACTTTTGTTGTAATTGATGATGAAAATGCTAGCATCGATTGTGGAAGGGCTGAAGCAGTTATGCGAGATGGTGGCATACGCCTCCTTCTTAGCCTTGCAAAATCTTACAGGGAAGGGCTTCAGTCTGAGGCAGCTAAGGCTATTGCGAATTTGTCCGTGAATGCCAATGTGGCCAAGGCAGTTGCAGAAGAGGGCGGGATTGAGATTCTCGCTAGTTTGGCTAGGTCAATGAACAAACTGGTGGCTGAAGAGGCTGCTGGAGGATTATGGAATCTCTCTGTTGGAGAAGAGCACAAGGGCGCCATTGCTGAAGCTGGTGGAGTACAAGCTTTAGTGGATCTTATATTCAAGTGGTCGTCTACCGGAGATGGAGTTTTGGAACGTGCAGCCGGTGCATTGGCTAATTTGGCTGCTGATGACAAGTGCAGTACAGAGGTTGCATTAGCAGGAGGTGTACATGCTCTAGTGATGCTCGCTCGTAACTGCAAATATGAGGGAGTGCAAGAGCAGGCTGCTCGTGCATTGGCGAATTTAGCTGCTCATGGAGATAGCAACAGTAACAATGCTGCCGTTGGACAAGAAGCAGGTGCTCTTGAGGCTCTTGTTCAACTTACACGTTCTGCCCATGAGGGTGTCAGACAAGAAGCTGCTGGTGCACTTTGGAATTTATCATTTGACGATAGAAATCGAGAGTCCATTGCAGCAGCTGGTGGAGTTCAAGCTTTGGTTGCTCTTGCCCAATCTTGTTCTAATGCTTCCCCTGGACTTCAAGAGAGGGCTGCTGGTGCTCTATGGGGATTGTCAGTTTCTGAAACCAATAGCATTGCCATTGGACGAGAAGGAGGCGTTGCACCTCTGATTGCACTGGCACGGTCCGAAGCAGAGGATGTTCATGAAACGGCTGCAGGAGCACTTTGGAATCTTGCTTTCAACCCTGGTAATGCTTTACGAATAGTGGAGGAAGGTGGAGTAGCTGCACTTGTTGAACTCTGCTCTTCATCAGTGTCAAAGATGGCACGATTTATGGCCGCACTGGCTTTGGCCTACATGTTTGATGGGAGAATGGATGAATTTGCTTTAGTCGGCACCATGTCAGAAAGTGTTTCTAAGAGTGTGGGCTTGGATGGAGCCAGAAGAATGGCTCTGAAACACATTGAAACATTCGTCCGCATGTTTTCTAATCAACAAGCATTTGCGGCTGCCGCTTCATCGTCAGCTCCTGCAGCACTAGCACAGGTTACTGAAAGTGCTCGCATTCAAGAAGCTGGACATCTGAGATGCAGTGGTGCTGAAGTTGGAAGATTTGTTACTATGCTAAGAAATCCGTCGTCTGTACTCAAAGCTTGTGCAGCATTTGCTCTTCTCCAGTTTACGATTCCTGGTGGACGACACGCTGTGCACCATGCCAGCCTCATGCAGAAAGCAGGTGCAGCAAGAGTTCTGCGTAGTGCAGCCGCCGCAGCAACTGCGCCTCTTGAAGCAAAAATCTTTGCCAGGATTGTTCTTCGTAATCTCGAGTATCACCACATAGAACATACTGTGTAG 2754 0.4619 MSRRVKRKVARKGKGNVVSSFPGIQDEVADLEAGGVVDWRSLPDDTVLQLLSCLSYRDRASLSATCKTWRVLGNSPCLWSSLDLRSHKFDANVASSLASRCVHLQKLRFRGAESADALLHLRAKNLREINGDGCRKMTDATLAVVAARHELLESLVLGPDFCDKVTSDAIKAIAQCCPNLIKLRLSGIRDVNADAINALANCCSKLTDIGFIDCLSVDELALGNVQSVRFLSVAGTPSMKWSVVSHLKLPNLIGLDVSRTDVGPSAVSRLLSSSPNLRVLIALNCPILEEETSFSASKYKNKLLISLSTDIFKGLASLFFDNTNRGKNVFLDWRTSNSYNDKGLGEIIPWLEWMLSHILLRSAESPQQGGLDKFWVEQGASLLLSLMQSSQEDVQERAATGLATFVVIDDENASIDCGRAEAVMRDGGIRLLLSLAKSYREGLQSEAAKAIANLSVNANVAKAVAEEGGIEILASLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAEAGGVQALVDLIFKWSSTGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARNCKYEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSAHEGVRQEAAGALWNLSFDDRNRESIAAAGGVQALVALAQSCSNASPGLQERAAGALWGLSVSETNSIAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGVAALVELCSSSVSKMARFMAALALAYMFDGRMDEFALVGTMSESVSKSVGLDGARRMALKHIETFVRMFSNQQAFAAAASSSAPAALAQVTESARIQEAGHLRCSGAEVGRFVTMLRNPSSVLKACAAFALLQFTIPGGRHAVHHASLMQKAGAARVLRSAAAAATAPLEAKIFARIVLRNLEYHHIEHTV* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0070 917 Gene3D - 680 758 IPR011989 -
Mal3g0070 917 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 599 641 IPR000225 GO:0005515
Mal3g0070 917 Gene3D - 521 588 IPR011989 -
Mal3g0070 917 Gene3D Ribonuclease Inhibitor 32 315 IPR032675 -
Mal3g0070 917 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 468 510 IPR000225 GO:0005515
Mal3g0070 917 SMART arm_5 457 497 IPR000225 GO:0005515
Mal3g0070 917 SMART arm_5 629 672 IPR000225 GO:0005515
Mal3g0070 917 SMART arm_5 714 755 IPR000225 GO:0005515
Mal3g0070 917 SMART arm_5 498 541 IPR000225 GO:0005515
Mal3g0070 917 SMART arm_5 542 583 IPR000225 GO:0005515
Mal3g0070 917 SMART arm_5 416 456 IPR000225 GO:0005515
Mal3g0070 917 SMART arm_5 588 628 IPR000225 GO:0005515
Mal3g0070 917 SMART arm_5 673 713 IPR000225 GO:0005515
Mal3g0070 917 Pfam Armadillo/beta-catenin-like repeat 499 541 IPR000225 GO:0005515
Mal3g0070 917 Pfam Armadillo/beta-catenin-like repeat 676 712 IPR000225 GO:0005515
Mal3g0070 917 Pfam Armadillo/beta-catenin-like repeat 552 583 IPR000225 GO:0005515
Mal3g0070 917 Pfam Armadillo/beta-catenin-like repeat 629 671 IPR000225 GO:0005515
Mal3g0070 917 Pfam Armadillo/beta-catenin-like repeat 462 496 IPR000225 GO:0005515
Mal3g0070 917 Pfam Armadillo/beta-catenin-like repeat 591 627 IPR000225 GO:0005515
Mal3g0070 917 Gene3D - 589 679 IPR011989 -
Mal3g0070 917 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 684 726 IPR000225 GO:0005515
Mal3g0070 917 SMART fbox_2 42 82 IPR001810 GO:0005515
Mal3g0070 917 SUPERFAMILY ARM repeat 374 744 IPR016024 -
Mal3g0070 917 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 640 685 IPR000225 GO:0005515
Mal3g0070 917 PANTHER PROTEIN ARABIDILLO 1 1 903 IPR044583 -
Mal3g0070 917 Pfam F-box-like 39 85 IPR001810 GO:0005515
Mal3g0070 917 SUPERFAMILY RNI-like 62 292 - -
Mal3g0070 917 Gene3D - 354 520 IPR011989 -
Mal3g0070 917 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 553 584 IPR000225 GO:0005515
Mal3g0070 917 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 427 469 IPR000225 GO:0005515
Mal3g0070 917 ProSiteProfiles F-box domain profile. 36 82 IPR001810 GO:0005515
Mal3g0070 917 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 509 554 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0070 570 757 U-box Gene Family AT2G23140 34.921 4.00e-19 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0070 - - gmx:100819086 1485.32