Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0064 ATGTCAGCCCTTGTCCTTGTTGTATTTTTCTCAATTCTGGACCTATTTTCAGGAATATCAACACCAGGAGGAGTTTGCAACAAGGCTGGAAGCATAAAAGCAATCAACAAATATTTTGCAACGACGTCTGAGATTCACTTTGCAACACTCAACTTGCCTACTTTCCACAATTTAGAAATCCTTGTTATCAGATCAATTGGACTAAAAGGGACTATCCCAAAAGAAATTGGTCTTCTCTCCAAACTCACTTATCTTGATCTATGTGACAATCATCTTGAAGGTGAGATACCTCGGTCGTTGGGCAACCTTAGACAATTAAAATACTTAGACATCTCTTACAACAACCTTCAAGGTTCCATTCCTCCTGAGATGAGATACATTCAAAACCTCATTGCATTAAATATTTCTCACAATAGAATCTTAAGTGACATTTCTCCTTCACTAGGAAATCTCACCAAACTCACTCATCTTATTTTGTTTGATAATTCTCTTGTAGGTGAGATACCTCATTCACTAGGAAATCTCACCGAACTCAATCATCTTGATCTCTTTAACAATTCTCTTGTAGGTGAGATACCTCCTTCAATAGGAAATCTTAGACAATTAGAGTTCCTAGACATCTCTTTTAACAATATTCATGGTTCCATCCCTCCCGAGTTGTGGTTACTAAAAAACCTCACTCAATTATTTCTATCTAACAATAGATTAAAATGTGAGATACCTTCTTCACTAGGAAATCTAAAACAATTAGAGTTCCTAGACATCTCTAACAACTACAGTCAAGGTTCAATTCCTCTTGAGTTGTGGTTCTTGAAAAATCTCTCTGGATTAGATCTATCTAACAATAGATTCAATGGAAACTTGTCTATTTTTCTTACAAATCTCACGCAATTAGAATACCTTAACATCTCATATAATTTTCTCACTGGTTTCCTTCCATTTAACTTACCATATTATTACACGACTTACATGGACCTCAGTCACAACCTCATTAGTGGTGAAATTCCTTCTCAGCTTGGATATTTTCATCAACTTCTTTTAAGCAATAATAGTCTCACTGGAACAATTCCCCAATCTATTTGTAATGTTCATTTTATGAACATATCCTACAATTATTTAAGGGGTTCCATTCCAAATTGTATTGTTGATCCTTCTTCAATAATAGGGAACAAGGATTTATGTACAAACTTTCCAAGCAAGAAATTCCAATTCCAACCTTGCTCACCTCCCAAGAAAAGCAATAAATTAAAGAGTCATGTTTTCATTGCTCTTCCTATTCTTATGATTCTAATCTTAGCCTTATCACTTCTCATATGCTTCAAACTTTGTCATAGTTCTGTTAAGAACAAGCATGCAAACACAACAAAAACAAAGAATGGAGATATGTTTTGTATATGGAATTATGATGGGAAGATAGCATATGATGACATAATGGGAGCAACAGAAGACTTTGACATGAAATATTGCATTGGAACAGGAGCATATGGAAGTGTTTACAAGGCACAATTACCCAGTGGCAAAGTTGTTGCCTTAAAGAAACTTCACGGCTATGAAGCAGAGGTTCCATCTTTTGATGAGAGTTTCAGAAATGAAGTGAGAATATTATCAGAAATAAAGCACAAACATATTGTGAAACTTCATGGATTCTTCTTACACAAAAGAATCATGTTTTTGATCTATCAGTACATGGAGAAAGGAAGCCTGTTCTCTGTTTTATATGATGATGTAGAAGCTGTGGAATTCAAGTGGAGAAAAAGGGTTAATGCTGTTAAAGGAGTTGCATTTGCTATATCATATCTTCACCATGATTGCACGGCTCCAATAGTGCATAGAGATGTATCTACTAGCAATATCTTGCTTAACTCTGATTGGCAGGCCAGTGTCTCTGACTTTGGCACAGCTCGACTCCTTCAATATGATTCATCTAATCGAACTATAGTTGCTGGAACTATTGGATATATTGCTCCTGAGCTTGCATATACTATGGCTGTGAATGAAAAGTGTGATGTATATAGTTTTGGTGTAGTGGCACTTGAAACTTTAGTTGGAAGGCACCCTGGGGATTTATTGTCAGCGCTGCGATCAACATCGACACAAAGTATCAAATTATGTCAAGTATTAGACCAACGTCTTGCAATTCCAAATAATGACATAGTTATACGTGACATAATTCATGTTGCCGTGGTAGCATTTGCATGCTTAAATTTCAATCCTCGTTCTCGACCAACAATGAAATGTGTGTCACAAAGTTTTGTCAGTGAGCTTACACCATTAAACATTCCTTTGAGTGGAATTTCAGTGCAGCAACTCATGAGTCAAGAACTCAAAGCATTATTTTATATGTGA 2346 0.3589 MSALVLVVFFSILDLFSGISTPGGVCNKAGSIKAINKYFATTSEIHFATLNLPTFHNLEILVIRSIGLKGTIPKEIGLLSKLTYLDLCDNHLEGEIPRSLGNLRQLKYLDISYNNLQGSIPPEMRYIQNLIALNISHNRILSDISPSLGNLTKLTHLILFDNSLVGEIPHSLGNLTELNHLDLFNNSLVGEIPPSIGNLRQLEFLDISFNNIHGSIPPELWLLKNLTQLFLSNNRLKCEIPSSLGNLKQLEFLDISNNYSQGSIPLELWFLKNLSGLDLSNNRFNGNLSIFLTNLTQLEYLNISYNFLTGFLPFNLPYYYTTYMDLSHNLISGEIPSQLGYFHQLLLSNNSLTGTIPQSICNVHFMNISYNYLRGSIPNCIVDPSSIIGNKDLCTNFPSKKFQFQPCSPPKKSNKLKSHVFIALPILMILILALSLLICFKLCHSSVKNKHANTTKTKNGDMFCIWNYDGKIAYDDIMGATEDFDMKYCIGTGAYGSVYKAQLPSGKVVALKKLHGYEAEVPSFDESFRNEVRILSEIKHKHIVKLHGFFLHKRIMFLIYQYMEKGSLFSVLYDDVEAVEFKWRKRVNAVKGVAFAISYLHHDCTAPIVHRDVSTSNILLNSDWQASVSDFGTARLLQYDSSNRTIVAGTIGYIAPELAYTMAVNEKCDVYSFGVVALETLVGRHPGDLLSALRSTSTQSIKLCQVLDQRLAIPNNDIVIRDIIHVAVVAFACLNFNPRSRPTMKCVSQSFVSELTPLNIPLSGISVQQLMSQELKALFYM* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0064 781 SUPERFAMILY Protein kinase-like (PK-like) 464 749 IPR011009 -
Mal3g0064 781 Pfam Leucine Rich Repeat 297 313 IPR001611 GO:0005515
Mal3g0064 781 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 144 300 - -
Mal3g0064 781 Gene3D Transferase(Phosphotransferase) domain 1 563 757 - -
Mal3g0064 781 Pfam Leucine rich repeat 81 140 IPR001611 GO:0005515
Mal3g0064 781 Gene3D Ribonuclease Inhibitor 145 405 IPR032675 -
Mal3g0064 781 ProSiteProfiles Protein kinase domain profile. 484 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0064 781 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 33 218 - -
Mal3g0064 781 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 293 778 - -
Mal3g0064 781 Gene3D Ribonuclease Inhibitor 19 144 IPR032675 -
Mal3g0064 781 ProSitePatterns Protein kinases ATP-binding region signature. 490 512 IPR017441 GO:0005524
Mal3g0064 781 Gene3D Phosphorylase Kinase; domain 1 444 562 - -
Mal3g0064 781 Pfam Protein kinase domain 489 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0064 781 SMART LRR_typ_2 223 247 IPR003591 -
Mal3g0064 781 SMART LRR_typ_2 151 175 IPR003591 -
Mal3g0064 781 SMART LRR_typ_2 199 222 IPR003591 -
Mal3g0064 781 SMART LRR_typ_2 79 103 IPR003591 -
Mal3g0064 781 ProSitePatterns Tyrosine protein kinases specific active-site signature. 608 620 IPR008266 GO:0004672|GO:0006468
Mal3g0064 781 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 33 218 - -
Mal3g0064 781 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 293 778 - -
Mal3g0064 781 SUPERFAMILY L domain-like 47 381 - -
Mal3g0064 781 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 144 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0064 Mal-Chr3 2439402 2442257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0064 55 656 Receptor kinase-like Gene Family AT4G08850 37.608 1.80e-130 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal3g0064 Pkinase 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0064 - - mtr:MTR_8g047230 969.148