Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0041 ATGTTGTCATTCATCATGTTCCGAAATTCTTCCTCGAGACCCTTTTCGAGTCTAGTAAGATGTTCAAACTTGCAGCTAGTTTCGGCCATAACCAATGGCTCTCTTGGTTTCTTGCATTTATGCTTAGGAATTTGGGTGTTAGAAGATAAGATAAGGAAAAACCACAATGCATTTCCTCTTAATTTGTGGTTACTAGAACTCTTTCAGGGATTCACATGGTTTTTTGTAAGTTTAGCTATAAGTCTTCAGATTAAACAAATCCCAAGAGCATGGTTGTGTCTGTGTTCTATTCTCATATTCTTTGTTTCTGGTATACTATGTGCTTTATCCATAATTTATGCAATTGGAAACACAGAATTGTCCCTCAAGGAAGCTTTAGATGTTATATCTTTTCCAGGAGCAAGTTTGTTGATGTTATGCACTTACAAAGCATGTAAACGTGAAGACGACGATGCTGACAGAGAAACTACTGAAAGGCTTTATGCCCCCTTAAATAGCCGGGTCAATAATGTTTCTCATTGTCATGTCACCCCATTTGCCAAAGCTGGATTCTTTAGTAAGATATCTTTTTGGTGGTTGAATCCATTGATGAAAAGCGGTCAAGAAAAAACACTTCAAGACGACGATATTCCAAAGCTAAGAGAGTCTGAAAGAGCAGAAAATTGTTATTTTTCATATGAAGCATCATCACGTTCGTCGGTATTATGGACTATAATTTCGTGTCATCGGAGAGATATTTTGATAACAGGATTCTTTGCTTTGCTCAAGGTACTTGCAATATCTTGTGGCCCTCTACTTCTGAATGCATTTATTTTAGTTTCTGAGGGTAATGAAAGTTTCAAATATGAAGGTTATATATTGGCCATATCACTCTTCTTCATGAAGATCATAGAATCGCTATCACAAAGACAATGGTATTTTCGCAGTAGAGTTGTTGGGATGAAAGTGAGATCACTACTTACTGCAAAAATTTATAAAAAAATATTAAGACTATCAAATTCTTCTAGATTGATTCATTCTAGTGGTGAAATAATGAATTATATGACTGTGGATGCTTATAGAATTGGAGAATTTGCTTTCTGGTTTCATCAGACATGGACAACAATCCTTCAATTGTGTATTGCATTAATAATTCTTTACCGAGCGATTGGTCTAGCAACAATAGCTTCATTGGTGGTGATAGTTCTCACTGTGCTTTGCAACAGTCCAATAGCAAAGTTACAAAACAAGTTTCAAAGCGAACTTATGGTGGCACAAGATGAGAGATTGAAGGCTAGTTCTGAGGCTCTTGTGAATATGAAAGTGCTCAAGTTATATGCTTGGGAAACACATTTTAAAAATTCTATCGAAAAGTTAAGAACTGCGGAACTGAAATTGATATCTGCGGTTCAATTAAGTAGGGCGTACCTTCTCTTTCTCTTTTGGACCTCGCCGGTGTTAGTGTCTGCTGCTTCTTTTCTAGCATGTTACTTCCTTGAAGTTCCTTTGCATGCAAGTAATGTTTTCACTTTTGTGGCAACTTTAAGCCTTGTTCAAGTGCCAATTACAGGTATACCGGATGTCATTACGGTGATCATTCAAGCAAAAGTTGCATTTGCTCGGATATGTAGTTTCCTCGAGGCACCAGAACTAGAAAGTGCAAATTTCAATAACATCATCTGTAATGACAACCTCAAAGGCTCGGTTTTAATAAAATCAGCCGACTTTTCATGGGAAGGTAATGTACCAAAGCCAACATTAAGAAACATAAACTTGGACGTTAGACACGGGCAAAAGGTGGCTATTTGCGGAGAAGTTGGCTCGGGAAAATCAACTCTCTTAGCAACAATTCTTGGAGAAGTTCCTAGTACAACGGGATCTATTGATATTTACGGGAAGTTCGCATATGTTTCTCAAACAGCGTGGATACAAACAGGTACAATACGGGAAAATATTTTGTTTGGTTCTGAGTTGGATGATCAACGATATCAAGAAACACTTCAAAGGTCTTCATTGGTAAAGGACCTTGAGTTGCTTCCCTACGGTGATCTCACAGAAATAGGCGAGAGAGGAGTTAATTTAAGTGGAGGTCAGAAGCAGCGAATTCAACTAGCTCGTGCTCTTTATGAGAATGCTGATATATATCTCTTGGATGATCCGTTTAGCGCTGTTGATGCACATACGGCAAAAAATTTGTTTAATGAATACATCATGGAAGGACTCAAAGGGAAAACCGTCTTACTCGTGACTCATCAAGTTGACTTTCTCCCAGCATTTGATTTTGTTTTGTTGATGTCTGATGGGGTAATCCTACAAGCTGGTCCATATCAGCAGCTATTGACCTCGAGCAACGAATTCCAAGACCTTGTCGATGCTCACAAGACGACTGCTGGTTCTAACCACCTTGCGAATGTTACTTGTTCTCAGAGATATTCAACTTCTAGAAAGGTTACGCAAACTTTAGTGGAAAAGAAGATTAACGAAACAGATGGAAATCAATTAATTAAGCAAGAAGAAAGAGAGAAAGGAGACAAAGGGTTGAAGCCTTACTTACAATATCTGAATCAGATGAAAGGCTATATATTCTTCTTTGTGGCGTCACTTTGTCACCTTATTTTTCTGGTTTGTCAAATATTGCAAAACTCGTGGATGGCTGCGAATGTAGACAATCCTCGTGTCAGCACGTTGCAGTTGATTTTAGTTTACTTCCTACTCGGAGTTTCTTCAGCATTTTTCATGTTGACTAGAAGTCTATTTGTAGTTGCTTTGGGTCTTCAATCGTCAAAATACTTATTTTTACGTCTGATGAACTCCCTCTTTCGTGCACCGATGTCTTTTTATGATGCTACACCATTGGGAAGGATACTAAGTAGGGTTTCATCTGATCTGAGCATTATGGATCTTGACATCCCGTTTAGCCTCACTTTCGCGGTGGGAACCACTATGAATTTTTATTCGACTCTTACAGTTTTAGCAGTCATCACTTGGCAAGTATTGATTTTGGCTATACCGATGGTCTATGTTACAATTCGCTTGCAGAGATACTACTTCACCGCAGCAAAAGAAGTGATGCGGATAAATGGCACAACAAAATCCTATGTAGCTAATCATGTAGCTGAAACTGTTGCCGGAGCAGTGACAATACGGGCTTTTGAGGAGGAAGATCGTTTTTTTGAGAAGAATCTTAATCTAATTGACATTAATGCTAGTGCATATTTTCATAATTTCGCCTCAAATGAGTGGTTGATCCAACGGTTAGAAACAATAAGTGCAGGTCTTCTTGCCTCGGCAGCGCTTTGCATGGTCATACTTCCACCAGGGACTTTCACCTCTGGATTTATTGGTATGGCTCTATCTTATGGCCTTACACTAAATGCTTACTTAGTAAATTCAATTCAAAGTCAGTGCACTCTTGCGAATCAAATAATATCAGTCGAGAGGCTAAATCAATATATGCATATACAAAGTGAGACCGAAGAAATAATAGAAGGAAATCGTCCTCCTTTGAATTGGCCGATTGCAGGCAAAGTAGAAATAAATGACTTGAAGATACGATACAGGCCTAATGGACCACTTGTACTTCATGGGATCACATGCACATTTGAAGCAGGTCATAAGATTGGTATTGTTGGAAGAACAGGCAGTGGGAAATCGACGCTTATTAGTGCTTTATTTCGTCTTGTGGAACCAACAGAAGGAAAAGTTGTAGTTGATGGCATAGACATCTCATCTATTGGCCTTCATGATTTGAGGTCGCGGTTTGGGATTATACCTCAAGATCCTACACTTTTTAACGGGACAGTAAGATATAACTTGGACCCTTTATCTCAACACGCTGATCAAGAGATATGGGAGGTTCTTCGGAAGTGTCAATTGCGAGAAGTTGTCCAAGAGAAAGATGAGGGCTTAAACTCCTCGGTTGTTGAAGATGGATCGAACTGGAGCATGGGACAAAGACAATTATTTTGCTTGGGGCGTGCGCTTTTAAGGAGAAGTAGAATATTGGTATTGGATGAAGCAACTGCATCGATTGATAATTCAACCGATCTGATTCTACAAAAAACCATCAGAACGGAGTTTGCAGATTGTACGGTTATCACAGTAGCACACAGGATACCAACTGTACTTGATTGCACTATGGTTCTTGCTATAAGTGATGGAAAATTGGCAGAGTATGATGATCCAATGAGCTTGATGAAGAGAGAAGAATCGTTGTTCAGGAAGCTTGTCAAAGAATACTGGTCACAGTTTCGATCTGTAGAATCGCATTGA 4251 0.3893 MLSFIMFRNSSSRPFSSLVRCSNLQLVSAITNGSLGFLHLCLGIWVLEDKIRKNHNAFPLNLWLLELFQGFTWFFVSLAISLQIKQIPRAWLCLCSILIFFVSGILCALSIIYAIGNTELSLKEALDVISFPGASLLMLCTYKACKREDDDADRETTERLYAPLNSRVNNVSHCHVTPFAKAGFFSKISFWWLNPLMKSGQEKTLQDDDIPKLRESERAENCYFSYEASSRSSVLWTIISCHRRDILITGFFALLKVLAISCGPLLLNAFILVSEGNESFKYEGYILAISLFFMKIIESLSQRQWYFRSRVVGMKVRSLLTAKIYKKILRLSNSSRLIHSSGEIMNYMTVDAYRIGEFAFWFHQTWTTILQLCIALIILYRAIGLATIASLVVIVLTVLCNSPIAKLQNKFQSELMVAQDERLKASSEALVNMKVLKLYAWETHFKNSIEKLRTAELKLISAVQLSRAYLLFLFWTSPVLVSAASFLACYFLEVPLHASNVFTFVATLSLVQVPITGIPDVITVIIQAKVAFARICSFLEAPELESANFNNIICNDNLKGSVLIKSADFSWEGNVPKPTLRNINLDVRHGQKVAICGEVGSGKSTLLATILGEVPSTTGSIDIYGKFAYVSQTAWIQTGTIRENILFGSELDDQRYQETLQRSSLVKDLELLPYGDLTEIGERGVNLSGGQKQRIQLARALYENADIYLLDDPFSAVDAHTAKNLFNEYIMEGLKGKTVLLVTHQVDFLPAFDFVLLMSDGVILQAGPYQQLLTSSNEFQDLVDAHKTTAGSNHLANVTCSQRYSTSRKVTQTLVEKKINETDGNQLIKQEEREKGDKGLKPYLQYLNQMKGYIFFFVASLCHLIFLVCQILQNSWMAANVDNPRVSTLQLILVYFLLGVSSAFFMLTRSLFVVALGLQSSKYLFLRLMNSLFRAPMSFYDATPLGRILSRVSSDLSIMDLDIPFSLTFAVGTTMNFYSTLTVLAVITWQVLILAIPMVYVTIRLQRYYFTAAKEVMRINGTTKSYVANHVAETVAGAVTIRAFEEEDRFFEKNLNLIDINASAYFHNFASNEWLIQRLETISAGLLASAALCMVILPPGTFTSGFIGMALSYGLTLNAYLVNSIQSQCTLANQIISVERLNQYMHIQSETEEIIEGNRPPLNWPIAGKVEINDLKIRYRPNGPLVLHGITCTFEAGHKIGIVGRTGSGKSTLISALFRLVEPTEGKVVVDGIDISSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHADQEIWEVLRKCQLREVVQEKDEGLNSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNSTDLILQKTIRTEFADCTVITVAHRIPTVLDCTMVLAISDGKLAEYDDPMSLMKREESLFRKLVKEYWSQFRSVESH* 1417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0041 1416 SUPERFAMILY ABC transporter transmembrane region 842 1152 IPR036640 GO:0005524|GO:0016021
Mal3g0041 1416 Pfam ABC transporter transmembrane region 247 511 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal3g0041 1416 Pfam ABC transporter transmembrane region 854 1105 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal3g0041 1416 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 564 785 IPR003439 GO:0005524
Mal3g0041 1416 Gene3D ABC transporter type 1, transmembrane domain 817 1152 IPR036640 GO:0005524|GO:0016021
Mal3g0041 1416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1160 1403 IPR027417 -
Mal3g0041 1416 CDD ABC_6TM_ABCC_D1 248 535 IPR044746 GO:0140359
Mal3g0041 1416 Pfam ABC transporter 580 714 IPR003439 GO:0005524
Mal3g0041 1416 CDD ABC_6TM_ABCC_D2 852 1145 IPR044726 GO:0140359
Mal3g0041 1416 Pfam ABC transporter 1187 1335 IPR003439 GO:0005524
Mal3g0041 1416 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 29 1416 - -
Mal3g0041 1416 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 554 784 IPR027417 -
Mal3g0041 1416 Gene3D ABC transporter type 1, transmembrane domain 231 543 IPR036640 GO:0005524|GO:0016021
Mal3g0041 1416 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 29 1416 - -
Mal3g0041 1416 CDD ABCC_MRP_domain1 562 761 - -
Mal3g0041 1416 ProSitePatterns ABC transporters family signature. 687 701 IPR017871 GO:0005524
Mal3g0041 1416 SMART AAA_5 589 762 IPR003593 -
Mal3g0041 1416 SMART AAA_5 1196 1379 IPR003593 -
Mal3g0041 1416 SUPERFAMILY ABC transporter transmembrane region 235 540 IPR036640 GO:0005524|GO:0016021
Mal3g0041 1416 CDD ABCC_MRP_domain2 1168 1388 - -
Mal3g0041 1416 Gene3D - 544 808 IPR027417 -
Mal3g0041 1416 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 247 527 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal3g0041 1416 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 857 1133 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal3g0041 1416 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1170 1404 IPR003439 GO:0005524
Mal3g0041 1416 Gene3D - 1154 1405 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0041 Mal-Chr3 1486685 1492192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0041 556 774 Calmodulin-binding Proteins AT2G36910 32.618 1.58e-25 113