Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0039 ATGGCTTTCACTACCTCAACCCTAGAAGAAAAGAAGAACAAGGTTCTCTTCATATTGGGTGCAACAGCAACTGGGAAAACTAAACTTTCCATCAACTTAGGTACTCATTTCCCTGCTGAAATTATCAACTCGGATAAAATTCAAGTTTATAAGGGTCTTGATATTGTCACCAATAAGGTACCGGAATCCGAACGTTGTTCGATTCCACATCACATATTAGGCATCATCGATGATCCGGAATATGATTTCAATGTGAATGATTTTTGCAAGCACGTGCTTGAAGCCCTAGACCTCATAATTGGCAATGGACACATACCTATTATTGTAGGAGGGTCAAATTCTTATCTAAAAAAATTAATTGAGGACCCAACCATTGCATTTCGTTCAAAATATGATTGTTGTTTCATTTGGCTCGACGTGTCTTTGCCTATTTTGTTTCAATATGTAGACAAAAGAGTTGATGAAATGGTTGAGGCAGGGATGGTAGATGAGATTAGAGATTATTTTGTACCTGGAGCGGACAACACAAAGGGAATTAGAAGAGCGATTGGGGTTCCTGAGCTCGACTCTTATTTTGAGATAGAGAAGAAAAAGTGTATTCATGATACTCAAAAGGAAAAGATAATGAAGGAAGCTATTAGAAAAACCAAACAAAACACTCGCATATTGGCTAAGAATCAACTCTTGAAGATCGAGAATATGGCTCATATGCTTGGATCAATGCTGAATAAAATTGATTCTACAAAAGTCTTTGAGGCCATTTTAAGGGGAGAAGATTATAAACATTTGCATCAAGAGATTGTGATTAAGCCAAGCATGGAGATAGTGAAGAGATTTCTAGAGGAGAAAACTAATGGATTTGGAAATGAAAAATATTCAAATGGAAATGGGAAACATACACCTAATGGTGTTTGA 915 0.3661 MAFTTSTLEEKKNKVLFILGATATGKTKLSINLGTHFPAEIINSDKIQVYKGLDIVTNKVPESERCSIPHHILGIIDDPEYDFNVNDFCKHVLEALDLIIGNGHIPIIVGGSNSYLKKLIEDPTIAFRSKYDCCFIWLDVSLPILFQYVDKRVDEMVEAGMVDEIRDYFVPGADNTKGIRRAIGVPELDSYFEIEKKKCIHDTQKEKIMKEAIRKTKQNTRILAKNQLLKIENMAHMLGSMLNKIDSTKVFEAILRGEDYKHLHQEIVIKPSMEIVKRFLEEKTNGFGNEKYSNGNGKHTPNGV* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0039 304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 171 IPR027417 -
Mal3g0039 304 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 142 242 - -
Mal3g0039 304 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 297 - -
Mal3g0039 304 Gene3D - 12 280 IPR027417 -
Mal3g0039 304 Pfam IPP transferase 48 122 - -
Mal3g0039 304 Pfam IPP transferase 129 228 - -
Mal3g0039 304 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 297 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0039 Mal-Chr3 1289508 1290422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0039 96 284 C2H2 Transcription Factor Family AT2G27760 31.776 5.02e-20 88.2