Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0020 ATGATGTATGGAACAATTTACAAGGCCTTAGAGGAGGCTGGACTTGAAAATGAGTATGAACCACATGACTACTTGAATTTCTTTTGCCTTGGCAATCGCGAGCTCGTCGACAATGAAAACATTTCAAATGGTGTAAAACCTACAGGACAAAACACTCCTCATAGATCCATGGAAGGGACTAGAGACATTGAGATTGCAATGGGAGCATATCAGCCTAATCATACTTGGGCAACCATTGAGAATTCAAGGTAA 252 0.4087 MMYGTIYKALEEAGLENEYEPHDYLNFFCLGNRELVDNENISNGVKPTGQNTPHRSMEGTRDIEIAMGAYQPNHTWATIENSR* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0020 83 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 51 79 - -
Mal3g0020 83 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 1 46 - -
Mal3g0020 83 PANTHER PHOSPHOLIPASE D 51 79 IPR015679 -
Mal3g0020 83 PANTHER PHOSPHOLIPASE D 1 46 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0020 Mal-Chr3 689155 689611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0020 1 77 Phospholipase D Gene Family (Wang group) AT4G00240 50.450 6.19e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0020 K01115 - gmx:100786241 120.553