Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5612 ATGCCGAAGAACAAGGGAAAGGGAGGAAAGAATCGAAAGCGAGGAAAGAACGAAGCAGACGATGAGAAACGTGAGCTTGTTTTCCAAGAAGACGGTCAACAATACGCACAAGTCCTCCGTATGCTTGGAAACGGACGCTGTCAAGCGATGTGCATCGACAGCAACGGCAACAAGTTTGAGCGTCTCTGTCACATTCGCGGTAAGATGCATAAGAAGGTTTGGATTGCTACTGGTGATATCATACTTGTTGGATTACGTGATTATCAAGATGATAAGGCTGATGTGATATTGAAGTATATGCCTGATGAAGCTAGGTTGTTGAAAGCTTATAAAGAGCTTCCTGAATGGCTTAGGCTTAATGAAGGGGTTGTTGCTGGGATGGATGATGATGATGATTTTGGTGATGATGTGGATGCTGTTCTTGCCGGTGGGACTGCCTCCGGAGGCGAGGTTTTGGAGGATTACGACGAAGTTGACGATATGTTTCAGCTTCAGAAAGGAAATGTTGTGTTTGCTTGTGCTTGGATGACGAAGATGATTGTTGGGAAGAAAGGGATTAGTGGTGGTAAGGTAAAGCCTATGTTTGTTCAGTTTGTGTTGGAGCCTCTGTGGCAGGATTCTAAGGTTGTGCTTCAAGCTGTTATGAGCCGTTGGCTTCCTCTTTCGGATGCCATTTTGTCAATGGTGGTGAAGTGTATACCGGATCTTGTGGTGGCACAGCATTCTCGGATATCGAGGCTGATTTCACAGTGCGATATTGGTTCTGAAAATGGGATTGATAGGAGGGTAGTGGAAGAGGCTGAGCTTGTGAGCAAGTCGGTGGATTTCTGCAAGAGGAGAGCAGCTGCAGCTGGAGAAGTTCATCTTGAGAGATGCATAAAGGATTTGAAGGATAGGTTTGCAAAAGTAAGCTTGGAAGTCTCTCCACCCCTTGTGTCCTACAAAGAGACCATTGAGGGAGAGGTATCCAACATGCTGGAAAATTTGAAAGTTCTTAGCAAGAACTTAGATTGTGTTGAGAAAACGACGCCCAATGGGAGATGCCTTGTTCGCGTGCAGGTGATGAAACTTCTACCTTCTCTCACAAAGGTGATTGATGAAAGTGCTAATTTACTTGGAGATATCATTGGAATAAAGTCAGGGAAGACAGTTGAAAGTTTGGAAACTAAGAGAACAAATATTCTCGAAAATGAGAATCCAGCTGAAGTGATTAAAAAACGCATAATGGATGCAATTGAGAGTGACATTTTGTGTAGATTGGAGTGGTTAAAGCTTTTGAGGAGGATATGGGCACTTGGACTGGGTTACCTCGGCGTGAGCATTCTCTTAGTCGTGATATTAAAGCAGAAAGTACTGATAACTCTGATCTGA 1371 0.4398 MPKNKGKGGKNRKRGKNEADDEKRELVFQEDGQQYAQVLRMLGNGRCQAMCIDSNGNKFERLCHIRGKMHKKVWIATGDIILVGLRDYQDDKADVILKYMPDEARLLKAYKELPEWLRLNEGVVAGMDDDDDFGDDVDAVLAGGTASGGEVLEDYDEVDDMFQLQKGNVVFACAWMTKMIVGKKGISGGKVKPMFVQFVLEPLWQDSKVVLQAVMSRWLPLSDAILSMVVKCIPDLVVAQHSRISRLISQCDIGSENGIDRRVVEEAELVSKSVDFCKRRAAAAGEVHLERCIKDLKDRFAKVSLEVSPPLVSYKETIEGEVSNMLENLKVLSKNLDCVEKTTPNGRCLVRVQVMKLLPSLTKVIDESANLLGDIIGIKSGKTVESLETKRTNILENENPAEVIKKRIMDAIESDILCRLEWLKLLRRIWALGLGYLGVSILLVVILKQKVLITLI* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5612 456 CDD S1_IF1A 33 113 IPR001253 GO:0003743|GO:0006413
Mal2g5612 456 SMART eIF1neu4 28 114 IPR001253 GO:0003743|GO:0006413
Mal2g5612 456 MobiDBLite consensus disorder prediction 1 25 - -
Mal2g5612 456 Gene3D - 2 139 IPR012340 -
Mal2g5612 456 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 1 136 - -
Mal2g5612 456 PANTHER EIF-1A 1 136 IPR001253 GO:0003743|GO:0006413
Mal2g5612 456 Gene3D Elongation Factor G (Translational Gtpase), domain 3 280 313 - -
Mal2g5612 456 Coils Coil 315 342 - -
Mal2g5612 456 SUPERFAMILY Nucleic acid-binding proteins 2 136 IPR012340 -
Mal2g5612 456 Hamap Translation initiation factor 1A [eif1a]. 16 114 IPR001253 GO:0003743|GO:0006413
Mal2g5612 456 ProSiteProfiles S1 domain IF1 type profile. 22 100 IPR006196 GO:0003723|GO:0003743|GO:0006413
Mal2g5612 456 Pfam Translation initiation factor 1A / IF-1 32 97 IPR006196 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5612 Mal-Chr2 135140959 135143987 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5612 1 128 Eukaryotic Initiation Factors Gene Family AT2G04520 82.812 2.48e-71 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5612 - - pvu:PHAVU_003G003900g 243.432