Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5593 ATGAGGTTCAACACCTTCTTGCCAACTGAGTATGAAATCAAACTTCCATTGGATTGTGATGATGAACCACAAAAAGATCGTAGGTTAGAGCCAAAAGATGCAGCAGCGTTTCTCGAGAAAGTTAAAGATGTGTTTCAGGGTAAGAATAGGGGAAAGTATCATGAGTTTATAGAAATTAATACGGTTTTCAAGGATGGAAGAATTGATAGAAGTGTTGTCGCGACAAGAGTGAGTGAGCTGTTTCAAGGGCATACACATTTAATTTTGGGATTCAATGCCTTCTTGCCAAAGAAATATCGAATCACACCTCGATTTGAGCTTGACACTGGGGAAAGATTGGAGGTAGCAGATAGCTATCAAATTTCTTGGGATGTGCTTGATATCATTTCCAGAGCTCTAGATTTCGATGACCTCTTTCAATTTGCTGGCGTGTGCAAGAATTGGAGGGAATTTCATAAAACCTATTGGAAAAAATTCTTGGCATCCCAAGAACCATTACTTATTCAAAGGTCTTCCCATGATAAGCAATCTTTTTCCTTCATCAGCATACCTGACCAAAAAGTTTATCACTCGAAGACGATCAATCAATTCTGGCAATTTGCCTATTCTGGGTGTTCGAGCGGATATTTGGTGTTGATAGGAGACACTAATTCTTTTCTGTTATTGAATCCTTTTACAAGAAGAAAGATGGTAATCAATACATCAACCTTTAAAGTCAATTTTTCTTATTTTGCTTACCATGTCTTGCTTGCTTTTGGCAAAGGCTCGGAGGAATTTGTCTTTGTCGCTTTATGCAAATGTTCTGGCAGTTTGAATGTCTATCAATCTCGAAATTCTGACTGGGTTACTTATTCGACAATAGGAAATCCAGGTAAGGTTGTTGACTTTGTTGTGTTGCATGATACTATATATGTTGTCACTGACAAGGCCACCGTAGGTGTACTCGACTTGAATTCCGCAATTATAAAATTTTTAGAACTGAAGAGTACTCCCGATGTAACATCTTCCTCACACCTAAGGTTGGTTAGTTGTGATGGACAACTTTTAGTGATTCATATTACGTCTGACGAAATATTGAATGTGTACAAAATAGACTTCTCAACCAAGAATTTTGTCAAGTTGGAAACTCTTGGCGACATTGCATTATTTTATGCTTCGGGAGAATACTTCTATGCATTGAGTAACCCGAGAAGATGGGGTTATGAAAGCAACTCTTTGCATATCATCAATCTCTCATCTAAAAAATGCATAGTGTGTTTGGGGGATGAAAACAAACTGCCGGAATACATTAAGCATGATAGGCTTCCAATTCCTCCAAAGGAAAATGCCTACTTGTTGGATTGGTGTTTTAAACATCTACGCAATGAGGTGGATTATTCTCTAGATGAGTAA 1392 0.3793 MRFNTFLPTEYEIKLPLDCDDEPQKDRRLEPKDAAAFLEKVKDVFQGKNRGKYHEFIEINTVFKDGRIDRSVVATRVSELFQGHTHLILGFNAFLPKKYRITPRFELDTGERLEVADSYQISWDVLDIISRALDFDDLFQFAGVCKNWREFHKTYWKKFLASQEPLLIQRSSHDKQSFSFISIPDQKVYHSKTINQFWQFAYSGCSSGYLVLIGDTNSFLLLNPFTRRKMVINTSTFKVNFSYFAYHVLLAFGKGSEEFVFVALCKCSGSLNVYQSRNSDWVTYSTIGNPGKVVDFVVLHDTIYVVTDKATVGVLDLNSAIIKFLELKSTPDVTSSSHLRLVSCDGQLLVIHITSDEILNVYKIDFSTKNFVKLETLGDIALFYASGEYFYALSNPRRWGYESNSLHIINLSSKKCIVCLGDENKLPEYIKHDRLPIPPKENAYLLDWCFKHLRNEVDYSLDE* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5593 463 SUPERFAMILY F-box domain 125 174 IPR036047 GO:0005515
Mal2g5593 463 ProSiteProfiles PAH domain profile. 27 98 IPR003822 GO:0006355
Mal2g5593 463 Gene3D Paired amphipathic helix 33 96 IPR036600 GO:0006355
Mal2g5593 463 SUPERFAMILY PAH2 domain 25 97 IPR036600 GO:0006355
Mal2g5593 463 Pfam Paired amphipathic helix repeat 52 95 IPR003822 GO:0006355
Mal2g5593 463 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 178 420 IPR011044 -
Mal2g5593 463 PANTHER OS06G0113600 PROTEIN 115 462 - -
Mal2g5593 463 PANTHER OS06G0113600 PROTEIN 115 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5593 Mal-Chr2 134763732 134765840 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5593 33 102 WRKY Transcription Factor Family AT4G12020 42.857 9.11e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal2g5593 PAH 9.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5593 - - cam:101488742 625.935