Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5589 ATGAACCCGAACTCAAGTCAATTAAACTTTGAAACCCTCACTTTAGCTCTGCCGCCCGCAGGTGCAATGATGAAGAAGTTCTCCAATGGTGATGATGCAGTAGCGTTAGTCACAGCACTAAAACTTAAGTTCCAATATGAGAATAGGGAAAAGTATGAATCTTTTCTACAAATTATGAAGGATTTCATGGCTGAAAGAATTGATACTAGGGTTGTCAAATTAAGAGTGTATGATTTGTTAAACGGCCATAACGATTTAATTTCGAGGTTCAACACCTTCTTGCCAACTGAGTATGCAATCAAACTTCCATTGGATCGTGATGATGATGATAAACCACAAAAAGATCGTAGGTTAGAGCCAAAGGATGCAGCAGCGTTTCTCGAGAAAGTTAAAGATGTGTTTCAGGGTAAGAATAGGGGAAAGTATCATGAGTTTATAGAAATTAATACGGCTTTCAAGGATGGAAGAATTGATAGAAGTGTTGTCGCGACAAGAGTGAGTGAGCTGTTTCAAGGGCATACACATTTAATTTTGGGATTCAATGCCTTCTTGCCAAAGAAATATCGAATCACACCTCGATTTGAGCTTGACACCGGGGAAAAAATGGAGGTAGACTATAGCTATCAAATTTCTTGGGATGTGCTTGATATCATTTCCAGAGCTCTAGATTTCGATGACCTCTTTCAATTTGCTGGCGTGTGCAATAATTGGAGGGAATTTCATAAAACCTATTGGAAAAAATTCTTGGCATCCCAAGAACCATTACTTATTCAAAGGTCTTCCCATGATAAGCAATCTTTTTCCTTCATCAGCATACCTGACCAAAAAGTTTATCACTCGAAGACGATCAATCAATTCTGGCAATTTGCCTATTCTGGGTGTTCAAGCGGATATTTGGTCTTGATAGGAGACACTAATTCTTTTCTGCTATTGAATCCTTTTACAAGAAGAAAGATGGTAATCAATACATCAACCTTTAAAGTCAATTTTTCTTATTTTGCTTACCATGTCTTGCTTGCTTTTGGCAAAGGCTCGGAGGAATTTGTCTTTGTCGCTTTATGCAAATGTTCTGGCAGTTTGAATGTCTATCAATCTCGAAATTCTGACTGGGTTACTTATTTGACAATAGGAAATCCAGGTAAGGTTGTTGACTTTGTTGTGTTGCATGATACTATATATGTTGTCACTGACAAGGCCACCGTAGGTGTACTCGACTTGAATTCAGCAATTATAAAAAAATTAGAACTTAAGAGTACTCCCGATGTAACATCTTCCTCACACCTAAGGTTGGTTAGTTGTGATGGACAACTTTTAGTGATTCATATTACGTCTGACGAAATATTGAATGTGTACAAAATAGACTTCTCAACCAAGAATTTTGTCAAGTTGGAAACTCTTGGCGACATTGCATTATTTTATGCTTCGGGAGAATACTTCTATGCATTGAGCAACCCAAGAAGATGGGGTTATGAAAGCAACTCTTTGCATATCATCAATCTCTCATCTAAAAAATGCATAGTGTGTTTGGGGGATGAAAACAAACTGCCGGAATACATTAAGCATGATAGACTTCCAGTTCCTCCAAAGGAAAATGACTACTTATTGGATTGGTGTTTTAAACATCTACGCAATGAGGTGGATTATTCTCTAGATGAGTAA 1659 0.3761 MNPNSSQLNFETLTLALPPAGAMMKKFSNGDDAVALVTALKLKFQYENREKYESFLQIMKDFMAERIDTRVVKLRVYDLLNGHNDLISRFNTFLPTEYAIKLPLDRDDDDKPQKDRRLEPKDAAAFLEKVKDVFQGKNRGKYHEFIEINTAFKDGRIDRSVVATRVSELFQGHTHLILGFNAFLPKKYRITPRFELDTGEKMEVDYSYQISWDVLDIISRALDFDDLFQFAGVCNNWREFHKTYWKKFLASQEPLLIQRSSHDKQSFSFISIPDQKVYHSKTINQFWQFAYSGCSSGYLVLIGDTNSFLLLNPFTRRKMVINTSTFKVNFSYFAYHVLLAFGKGSEEFVFVALCKCSGSLNVYQSRNSDWVTYLTIGNPGKVVDFVVLHDTIYVVTDKATVGVLDLNSAIIKKLELKSTPDVTSSSHLRLVSCDGQLLVIHITSDEILNVYKIDFSTKNFVKLETLGDIALFYASGEYFYALSNPRRWGYESNSLHIINLSSKKCIVCLGDENKLPEYIKHDRLPVPPKENDYLLDWCFKHLRNEVDYSLDE* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5589 552 SUPERFAMILY PAH2 domain 114 186 IPR036600 GO:0006355
Mal2g5589 552 ProSiteProfiles PAH domain profile. 116 187 IPR003822 GO:0006355
Mal2g5589 552 Pfam Paired amphipathic helix repeat 141 184 IPR003822 GO:0006355
Mal2g5589 552 Pfam Paired amphipathic helix repeat 50 94 IPR003822 GO:0006355
Mal2g5589 552 PANTHER OS06G0113600 PROTEIN 207 551 - -
Mal2g5589 552 PANTHER OS06G0113600 PROTEIN 207 551 - -
Mal2g5589 552 SUPERFAMILY PAH2 domain 30 98 IPR036600 GO:0006355
Mal2g5589 552 Gene3D Paired amphipathic helix 122 185 IPR036600 GO:0006355
Mal2g5589 552 Gene3D Paired amphipathic helix 32 95 IPR036600 GO:0006355
Mal2g5589 552 ProSiteProfiles PAH domain profile. 23 97 IPR003822 GO:0006355
Mal2g5589 552 SUPERFAMILY YVTN repeat-like/Quinoprotein amine dehydrogenase 267 509 IPR011044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5589 Mal-Chr2 134729171 134731663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5589 122 214 WRKY Transcription Factor Family AT4G12020 39.394 4.59e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal2g5589 PAH 1.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5589 K11644 - cam:101488742 655.595