Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5580 ATGGAATCCCGATTAGCTGATGGAAATGACGAGATGGAAGTTTCCGGCGATGCTGGTGTGAGTATGTATGGAGACCAGATACATCGAGAAACATATGAAGTGGAGCCGAATGATGGGTGTAGATTGGCAAGGAGTTATTCTGGGAGAGAGTTGGGTATCTCTGATCATGACCATGCTATTCAGGAACCATATGAAGGTATGGAATTTGCATCCGAAGATGCTGCTAAGATATTTTATGATGAATATGCCCGACATGTGGGATTTGTCATGCGTGTGATGTCTTGTCGGCGCTCAGAAAGAGATGGTAAGATTCTTGCCCGCAGGCTTGGATGTAATAAGGAAGGTCATTGTGTCAGCATACAAGGGAAATTTGGGCCAGTTCGTAAACCAAGGGCCAGCACAAGGGAAGGTTGTAAGGCAATGATTCATATCAAGTATGATCAGTCTGGAAAATGGGTGATAACAAAGTTTGTGAAAGATCATAATCATCCACTAGTAGTCTCTCCACGTGAAGCACGTCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAACTAACATCAGAGCTTCGGATTAAAAAACGGTTGTGTGTAACATATCAAGAACAATTAACTTCTTTTATGAAAATTGTGGAAGAACACAGTGACAAGCTGTCTGCAAGAATTCATCACATACTTCATAATCTTAAAGATTATGAATCCATAGAAGAGCTTTTGCACCAGACGTAG 729 0.4129 MESRLADGNDEMEVSGDAGVSMYGDQIHRETYEVEPNDGCRLARSYSGRELGISDHDHAIQEPYEGMEFASEDAAKIFYDEYARHVGFVMRVMSCRRSERDGKILARRLGCNKEGHCVSIQGKFGPVRKPRASTREGCKAMIHIKYDQSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTSELRIKKRLCVTYQEQLTSFMKIVEEHSDKLSARIHHILHNLKDYESIEELLHQT* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5580 242 Coils Coil 176 203 - -
Mal2g5580 242 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 30 241 - -
Mal2g5580 242 Pfam FAR1 DNA-binding domain 78 166 IPR004330 -
Mal2g5580 242 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 30 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5580 Mal-Chr2 134606077 134609242 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal2g5580 FAR1 2.6e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5580 - - gmx:100787741 413.69