Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5506 ATGACAAATATTCTTCCTGTGATATTGTTCGTCTTTATTCTCAATCTTCTATTGTTTTGCTCTCAATTATCCACCGCAATTGATACTATCACCCAATTTCAATCTCTCGATGATGGCAACACCTTGGTTTCTAATGATGGAACGTTTGAGTTGGGCTTTTTCACACCAGGTAGTTCAACAAATCGATATGTGGGAATATGGTACAAAAATATCCCAAAGAGAAGAGTAGTTTGGGTTGCAAACCGTGATAATCCAATCAAAGACAACAATTCCAACTCAACCATGTTGGTCATAAGCAAAGAAGGAAACCTTGTACTACTTACCAACAACAATCAAACTCTTGTTTGGTCAACAAACATCACAACACAATCATTGTCTACTACAAGTACTCATGTGGCTCAACTTCTAGACAGTGGAAACTTTGTAATCAAAGCCAACAACAATAGTAATAATCTTCTATGGCAAGGTTTTGACTTTCCTTGTGATACTTTGTTGCCAGAAATGAAGCTTGGATGGGACCATAAAACCGGTCTAAATCGTCGATTAACTTCATGGAAAAATTGGGATGATCCGTCTTCGGGGAATTTAACTTGGGGTATTGTCCTTAGTAGTAATCCAGAAGTTGTGATGAAGAAAGGGTCAGTTGAGATTCATAGGAGTGGTCCTTGGAATGGGATTGGATTTAGTGGAGCACCTGTGGAATTTGTTACTTCAATTGTTGAAATTAAAAGATCTATTAACAATTCAAATGAAGTTTATTACACATATAGTCTTGTAAACAAGAATGATATTTCAATAACTTATTTGAACCAAACACTTAGTGTTCGTCAACGCATTAGATGGACTCCAGAAGATAATATTTGGAGGATTTCTGAGTCAGTGCCAAAAGATGGTTGTGATGTCTATAATCTTTGTGGACCTTATGGAAATTGCATTCATAATGAGTCTCCGATTTGTCAATGTTTAGAAGGGTTTGAGCCTAGATCGCCACAAAATTGGGATATATCTAATTGGACACAAGGATGTGTGCGCAAAGGTGTAGAAGATTGGAGATGTGGGGTGAATGATAGTTTTGCAAGATTTTATGGATTGAAAATGCCCGATACAACACATACTTGGGTTGATGCTAATATGACACTTGAGAATTGTAAGAATAAATGCTTGGAAAATTGTTCTTGCATGGCTTATTCAAACTTGGATGTGGCTGGAGATGGTAGTGGTTGTTCTATATGGTTTGGTGATCTTATGGACTTAAAACAAATTTCATTATTCCAACAATATTTATATATTCGAATGGACGCTTCCACAGTAGATTCAAATGGAGATGTTTCTGATGGGCATAAGAAAAATCATACTTTGGCAATTGCAGTCACTATTCCGTTGGTCATCGCTTTGCTATTGGTGATCATAGTCTTCTATGTTTACATGAGAAAAAGAAAGCGAAGAGATAAATCAGAGATCAACACTTTAACTGAAGAGAAAGATGAAGATCAACAAGATTTTGAGCTTCCTTTCTTCAATATTTCTACAATGATAAGTGCCACAAATGACTTCTCAAACAATAACAAACTTGGAGAAGGTGGTTTTGGACCGGTCTATAAGGGTAGACTAGCTACAGATGGACAAGAGATTGCGGTCAAAAGGCTTTCAGGAAGTTCAAAACAAGGATCAAAAGAATTTAAAAATGAAGTTATATTATGTGCAAAACTTCAACACCGAAATCTTGTTAAGGTTCTTGGTTGTTGCATTCAAGGAGAAGAGAGAATGCTTATCTATGAATATATGCCCAACAAAAGCTTAGATTCATTTCTTTTTGATCCAGCTCAAAAGAAACTTCTAGATTGGTCTAAGCGCTTCAACATCATTTGTGGAGTTGCTCGTGGACTTATCTATCTGCATCAAGATTCTAGATTGAGGATCATACATAGAGATCTAAAGCCAAGTAATATTTTATTAGACAATGATATGAATCCAAAAATATCAGATTTTGGCTTGGCGAAAATTTGTGGAGATGATCAAGTTGAGGGAAATACAAAAAGAGTAGTTGGAACACATGGTTATATGGCTCCTGAATATGCCATTGACGGGCTATTCTCCACAAAATCTGATGTATTTAGCTTTGGCATATTATTGCTAGAGCTTGTAAGTGGGCAAAAAAATAAAGGACTTACATTTTCAAGCAACAACCATAATCTTGTTGGGCATGCTTGGAGGTTGTGGAAAGAGGAAAATTCAGAAGAATTGATTGATGATTGTCTCAAGGACTCATTTATTCTATCTGAAGCTTTACGATGCATACAAGTTGGTCTTTTATGTCTACAACTTCATCCAAATGATAGACCAAATATGACATCCGTGCTTGCGATGTTGACGAATGAAACTAATTTATCGCAACCAAAGGAACCCGGTTTCATAATCGAAAGGGTCTCTAATGAGGGAGAATCTACAACGAAGTCTTTCTCAATCAATGAAGTCACTATTTCGTTGATAGGTGCTAGATGA 2502 0.3637 MTNILPVILFVFILNLLLFCSQLSTAIDTITQFQSLDDGNTLVSNDGTFELGFFTPGSSTNRYVGIWYKNIPKRRVVWVANRDNPIKDNNSNSTMLVISKEGNLVLLTNNNQTLVWSTNITTQSLSTTSTHVAQLLDSGNFVIKANNNSNNLLWQGFDFPCDTLLPEMKLGWDHKTGLNRRLTSWKNWDDPSSGNLTWGIVLSSNPEVVMKKGSVEIHRSGPWNGIGFSGAPVEFVTSIVEIKRSINNSNEVYYTYSLVNKNDISITYLNQTLSVRQRIRWTPEDNIWRISESVPKDGCDVYNLCGPYGNCIHNESPICQCLEGFEPRSPQNWDISNWTQGCVRKGVEDWRCGVNDSFARFYGLKMPDTTHTWVDANMTLENCKNKCLENCSCMAYSNLDVAGDGSGCSIWFGDLMDLKQISLFQQYLYIRMDASTVDSNGDVSDGHKKNHTLAIAVTIPLVIALLLVIIVFYVYMRKRKRRDKSEINTLTEEKDEDQQDFELPFFNISTMISATNDFSNNNKLGEGGFGPVYKGRLATDGQEIAVKRLSGSSKQGSKEFKNEVILCAKLQHRNLVKVLGCCIQGEERMLIYEYMPNKSLDSFLFDPAQKKLLDWSKRFNIICGVARGLIYLHQDSRLRIIHRDLKPSNILLDNDMNPKISDFGLAKICGDDQVEGNTKRVVGTHGYMAPEYAIDGLFSTKSDVFSFGILLLELVSGQKNKGLTFSSNNHNLVGHAWRLWKEENSEELIDDCLKDSFILSEALRCIQVGLLCLQLHPNDRPNMTSVLAMLTNETNLSQPKEPGFIIERVSNEGESTTKSFSINEVTISLIGAR* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5506 833 Pfam Domain of unknown function (DUF3403) 791 833 IPR021820 GO:0004674
Mal2g5506 833 PIRSF SRK 1 833 IPR024171 GO:0004674
Mal2g5506 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 191 IPR036426 -
Mal2g5506 833 Coils Coil 480 500 - -
Mal2g5506 833 ProSiteProfiles EGF-like domain profile. 295 331 IPR000742 -
Mal2g5506 833 Gene3D - 21 156 IPR036426 -
Mal2g5506 833 Gene3D Phosphorylase Kinase; domain 1 476 594 - -
Mal2g5506 833 SMART blect_4 33 160 IPR001480 -
Mal2g5506 833 SMART ntp_6 353 432 IPR003609 -
Mal2g5506 833 ProSiteProfiles Bulb-type lectin domain profile. 27 156 IPR001480 -
Mal2g5506 833 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 35 827 - -
Mal2g5506 833 Pfam Protein kinase domain 519 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5506 833 CDD B_lectin 34 160 IPR001480 -
Mal2g5506 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Mal2g5506 833 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Mal2g5506 833 CDD PAN_AP_plant 352 431 - -
Mal2g5506 833 Pfam D-mannose binding lectin 76 186 IPR001480 -
Mal2g5506 833 SUPERFAMILY Protein kinase-like (PK-like) 500 806 IPR011009 -
Mal2g5506 833 Pfam PAN-like domain 352 418 IPR003609 -
Mal2g5506 833 Gene3D Transferase(Phosphotransferase) domain 1 595 804 - -
Mal2g5506 833 ProSiteProfiles PAN/Apple domain profile. 352 434 IPR003609 -
Mal2g5506 833 SMART serkin_6 518 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5506 833 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 35 827 - -
Mal2g5506 833 ProSiteProfiles Protein kinase domain profile. 518 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5506 833 Gene3D Hepatocyte Growth Factor 350 430 - -
Mal2g5506 833 CDD STKc_IRAK 524 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5506 Mal-Chr2 132910088 132939874 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5506 453 805 Receptor kinase-like Gene Family AT4G23190 50.420 9.70e-124 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal2g5506 Pkinase 8.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5506 - - mtr:MTR_3g007630 1453.73