Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5503 ATGACCAATACTCTTCCTATCAAAGTGCTTTTAATTATTTCCAATATATCATTGTTCTTCTTCTCTCAACTATCAACCGCAATTGATACAATCACCCAATTCCAATCTCTTGATGATGGCAACACATTGGTTTCTAATGATGGAACTTTTGAGTTAGGATTTTTCAGACCAGGTAGTTCCACAAATCGCTATGTGGGAATATGGTACAAAAACATCACAACTAGAAGAATAGTTTGGGTTGCAAACCGTGATAATCCAATCAAAGACAATAATTCCAACTCAACCATGTTGGTCATAAGCAAAGAAGGAAACCTTGTACTACTTACCAACAACAATCAAACTCTTGTTTGGTCAACAAACATCACAACACAATCTTTGTCTTCTACAAGTTCTCATGTAGCTCAATTATTAGACAATGGAAACTTTGTAATCAAAGCCAACAACAATAGTGATCAACAAAGTAATCTTTTCTTATGGCAAGGTTTTGATTTTCCTTGTGATACTTTGATGCCAGAAATGAAGCTTGGATGGGACTTAAAAACCGGTTTTAATCGTCAATTAACTTCTTGGAAAAATTGGGATGATCCATCTTCCGGAGATTTTACTTGGGGCATTGCTCTTAGAAGTAATCCAGAAATTGTATTGAAAAAAGGATCGGTTGAGATTCATAGGAGTGGCCCTTGGAATGGAGTTGGATTTAGTGGAGCACCCGCGGTGAGTGTTACTCGAATTGTTGAAACAAAATTTGTAAACAATTCAAATGAAGTTTATTACTCATACACTCTTGTGAACAAGAGTGAGGTTTCAATAACTTACTTGAACCAAACACTTGATAAGCGTCAACGCATAACATGGATTCCACAAGATAATATTTGGAGGGTTTATGAGGAAGTACCAAGAGATGATTGTGATGCCTATAATCCTTGTGGACCTTATGGAAAATGTATTCCAAATGAGTCTCCAATTTGTCAATGTTTAGAAGGGTTTGAGCCTAAATCACCACAAAATTGGAACACATTTAATTGGACACAAGGATGTGTGCGAAAAGGCGATGAAACATGGAATTGTGGTGTGAATGATGGTTTTGGAAAATTTTCTAGTTTGAAATTGCCAGAAACAACACATGCTTGGGTTGATGTTAATATGACAATTGAGGATTGTAAGAATAAATGCTTGGAAAATTGTTCTTGTATGGCTTATTCAAAGTTGGATGTGAGGGGAGATGGTAGTGGTTGTTCTATATGGTTTGGTGATCTTATAGGTTTGAAACAAGTTTCATCAGTTCAACAAGATCTATTTGTTCGAATGGATGCTTCTACAGTAGATTCAAATGGAGATGTTTCTGATGGGCATAAGAAAAATCATACTTTGGCAATTGCAATCACTGTTCCGTTGGTCATTGTTTTGCTACTCGTGATCATAGTCTTCTACATTTACAAAAGAAAAAGAAAGCAAAGAGCTATGGAAGATAAATCAAAGAACATTAGTTTAGCCGAAAATAAAGATGAAGACGAACGGGATTTTGAGCTTCCATTCTTCAATCTTTCTACAATAATTGATGCCACCAATGACTTCTCAAATGATAACAAGCTTGGAGAAGGTGGTTTTGGACCGGTATATAAGGGTACACTTGTTCTAGACAGACGAGAGATTGCCGTCAAAAGGCTTTCAGGAAGTTCGAAACAAGGAACAAGAGAATTTAAAAATGAAGTTATATTATGTTCAAAACTTCAACATCGAAATCTTGTCAAAGTTTTGGGTTGTTGTATTCAAGGAGAAGAGAGAATGCTTATCTACGAATATATGCCCAACAAAAGCTTAGATTCATTTCTTTTTGATCAAGCTCAGAAGAAACTTCTAGATTGGTCCAAGCGCTTTAACATCATATGTGGAATCGCTCGTGGACTTATTTATCTTCATCAAGATTCAAGATTGAGGATCATACATAGAGATCTAAAACCAAGTAACATTTTACTAGATAATGATATGAATCCGAAAATTTCAGATTTTGGCTTGGCAAAAATTTGTGGAGATGATCAAGTTGAGGGTAATACAAACAGTGTAGTTGGGACACATGGTTATATGGCTCCTGAGTATGCCATTGACGGACTATTCTCCATAAAATCCGATGTATTTAGCTTTGGCATATTACTGCTAGAGATAGTAAGTGGAAGGAAAAATAAAGGACTTTCATATCCAAGCGACAAACACAATCTTGTTGGGCATGCTTGGAGGTTGTATAAAGAAGGAAACTCAAAAGAATTGATTGAGGATTCTTTCGGAGACTCATACATTTTATCCGAAGCTTTACGTTGCATACAAGTTGGTCTTTTATGTTTACAACATCATCCAAATGACAGGCCTAATATGACTTCAATACTTGCAATGTTGACGAATGAAACCGCTTTAGCTCAACCAAAGGAACCTGGTTTCGTAATAGAAATGGTCTCTACTGAAAGAGAATCTACAACGGAAAACTTAATTTCTTCCTCCATCAATGAAGTCACTATTTCATTATTGGATGTTAGATGA 2532 0.359 MTNTLPIKVLLIISNISLFFFSQLSTAIDTITQFQSLDDGNTLVSNDGTFELGFFRPGSSTNRYVGIWYKNITTRRIVWVANRDNPIKDNNSNSTMLVISKEGNLVLLTNNNQTLVWSTNITTQSLSSTSSHVAQLLDNGNFVIKANNNSDQQSNLFLWQGFDFPCDTLMPEMKLGWDLKTGFNRQLTSWKNWDDPSSGDFTWGIALRSNPEIVLKKGSVEIHRSGPWNGVGFSGAPAVSVTRIVETKFVNNSNEVYYSYTLVNKSEVSITYLNQTLDKRQRITWIPQDNIWRVYEEVPRDDCDAYNPCGPYGKCIPNESPICQCLEGFEPKSPQNWNTFNWTQGCVRKGDETWNCGVNDGFGKFSSLKLPETTHAWVDVNMTIEDCKNKCLENCSCMAYSKLDVRGDGSGCSIWFGDLIGLKQVSSVQQDLFVRMDASTVDSNGDVSDGHKKNHTLAIAITVPLVIVLLLVIIVFYIYKRKRKQRAMEDKSKNISLAENKDEDERDFELPFFNLSTIIDATNDFSNDNKLGEGGFGPVYKGTLVLDRREIAVKRLSGSSKQGTREFKNEVILCSKLQHRNLVKVLGCCIQGEERMLIYEYMPNKSLDSFLFDQAQKKLLDWSKRFNIICGIARGLIYLHQDSRLRIIHRDLKPSNILLDNDMNPKISDFGLAKICGDDQVEGNTNSVVGTHGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGRKNKGLSYPSDKHNLVGHAWRLYKEGNSKELIEDSFGDSYILSEALRCIQVGLLCLQHHPNDRPNMTSILAMLTNETALAQPKEPGFVIEMVSTERESTTENLISSSINEVTISLLDVR* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5503 843 Gene3D Hepatocyte Growth Factor 352 435 - -
Mal2g5503 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Mal2g5503 843 SMART serkin_6 525 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5503 843 Pfam Domain of unknown function (DUF3403) 798 843 IPR021820 GO:0004674
Mal2g5503 843 Pfam Protein tyrosine and serine/threonine kinase 528 796 IPR001245 GO:0004672|GO:0006468
Mal2g5503 843 Gene3D Transferase(Phosphotransferase) domain 1 602 809 - -
Mal2g5503 843 CDD B_lectin 35 165 IPR001480 -
Mal2g5503 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 196 IPR036426 -
Mal2g5503 843 Gene3D Phosphorylase Kinase; domain 1 481 601 - -
Mal2g5503 843 Pfam D-mannose binding lectin 77 191 IPR001480 -
Mal2g5503 843 SUPERFAMILY Protein kinase-like (PK-like) 507 815 IPR011009 -
Mal2g5503 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 36 836 - -
Mal2g5503 843 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 36 836 - -
Mal2g5503 843 PIRSF SRK 1 843 IPR024171 GO:0004674
Mal2g5503 843 SMART blect_4 34 165 IPR001480 -
Mal2g5503 843 Pfam S-locus glycoprotein domain 224 333 IPR000858 GO:0048544
Mal2g5503 843 ProSiteProfiles PAN/Apple domain profile. 356 438 IPR003609 -
Mal2g5503 843 CDD STKc_IRAK 531 799 - -
Mal2g5503 843 Coils Coil 481 501 - -
Mal2g5503 843 SMART ntp_6 357 436 IPR003609 -
Mal2g5503 843 Pfam PAN-like domain 356 420 IPR003609 -
Mal2g5503 843 Gene3D - 22 161 IPR036426 -
Mal2g5503 843 ProSiteProfiles Bulb-type lectin domain profile. 28 157 IPR001480 -
Mal2g5503 843 ProSiteProfiles EGF-like domain profile. 299 335 IPR000742 -
Mal2g5503 843 CDD PAN_AP_plant 355 435 - -
Mal2g5503 843 ProSiteProfiles Protein kinase domain profile. 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5503 Mal-Chr2 132860949 132869544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5503 457 822 Receptor kinase-like Gene Family AT4G23190 50.663 4.35e-122 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal2g5503 PK_Tyr_Ser-Thr 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5503 - - mtr:MTR_3g007630 1345.1