Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5500 ATGTCTGTTCTTATTCGAAGAATTCGTTGTTGTTATTCGAACCTTGGCGGCTTTGGTAACAGAAGAAGTTACATTACAGAATCACCGTTTGAATCCAGCATTTCGCGACTACTCCGAAACGAGATGGAGTATCTAGCTGATATCGCTCCTCCACTCCAGCCTTACGAGAAGAAACTGTTGAATAATCCAATAAGGGATATCAAAGTGAAAAAGCTTGTACTCAACATCTCCGTTGGTGGTGAAAGTAGAGATCGTCTCATCAGAGCCGCCATGGTTCTTCAACACCTTAGCAATCAAACCCCTGTTTTCTCTAAAGCTAGGCACACCGGCCGTTCCTTTGGTGTTAAAAGGAATGAAAAGATTGCTTGCTACGTCACTGTTAGAGGCGACAAGGCAATGCAGGTTTTGGATAGTGGTTTGAAGGTCAAGAAATATGAGCTGTTGAGGAGAAACTTCAGTGATACCGGTTGTTTTCGCTTCAGTATTCAGGACCATATTGAAATTGGATTCAAGTATGATGCTTCTTCTGGTGTTTATGGAATGAATTTCTTTGTTGTCTTGGAGCGCCCTGGTAATCGTGTGGGACGCAGTCGCCATTGCAAGGCACGTGTTGGAATCCAACATCTTGTCACAAAGGATGATGCCATGAAGTGGTTCCAAGATAAATATGAAGGTGTGATCCTAAACAAGTCCGATGAGTTCAACCCATTCTTAAGTATGAGTTCTAGATTTTATTGA 738 0.4241 MSVLIRRIRCCYSNLGGFGNRRSYITESPFESSISRLLRNEMEYLADIAPPLQPYEKKLLNNPIRDIKVKKLVLNISVGGESRDRLIRAAMVLQHLSNQTPVFSKARHTGRSFGVKRNEKIACYVTVRGDKAMQVLDSGLKVKKYELLRRNFSDTGCFRFSIQDHIEIGFKYDASSGVYGMNFFVVLERPGNRVGRSRHCKARVGIQHLVTKDDAMKWFQDKYEGVILNKSDEFNPFLSMSSRFY* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5500 245 Gene3D - 55 231 IPR022803 -
Mal2g5500 245 PANTHER 60S RIBOSOMAL PROTEIN L11-2 56 233 - -
Mal2g5500 245 Pfam Ribosomal protein L5 62 116 IPR031310 -
Mal2g5500 245 Pfam ribosomal L5P family C-terminus 120 218 IPR031309 -
Mal2g5500 245 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 56 233 IPR002132 GO:0003735|GO:0005840|GO:0006412
Mal2g5500 245 SUPERFAMILY RL5-like 62 227 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5500 Mal-Chr2 132848768 132850560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5500 57 231 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 78.286 1.49e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5500 K02868 - ini:109155933 280.796