Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5452 ATGGATAGGATTCAAGAAGCAGATGAAAATAATAAATCATTAGTTGTTGCTCTTGCAATCAAGGGTAACAAGAAAAGCAAATATGTTACACAATGGGCACTTGATAAATTTGTTCATGAAGGGATAAGTATCTTCAAGCTTATACATGTCAGGGCTGTTATAAAAGGAGTTCCAACACCAATGGGAGATGTGCTACCTCTTTCGCAAGTGCGCAATGATGTAGCAACTTCGTTCAAAAGGGAAGTGGAGTGGCAAACAAATCAAATGCTTCTACCATTTAAGAGTTTGTGTGAGCAGAGAAAGGTGCATGTAGATGTTGTAGTGATTGAATCTGATGATGTAGCAACTGCAGTAGCAGAGGAAGTAGGTAGGGATGCTATTACCAAACTTGTCCTTGGAGCTTCATCTTCTGGTATATTTAGAAGCAAACATAAGGGTATGTCTGCAAAAATATCGGTATGCACTCCAAGATTTTGTACAGTTTATGCTGTTTCCAAAGGAAAATTGTCCATACGGCCTTCAGACACAGAGATTGATGGAAGCATTATAGATAATACCAGTGAAATCAGTTTTTCCTCCAGCAGCTCATCAAACTACACTTCCACTTCTCAGACAGATTCTGGCTCAGTTGCATCATGTAATGCTTTACATTCCTATGCCATGGCAACACGACGAGTTAAAGCTCACTCGAGTGTAGATCAGACCCTTCTAAGCACAAGTCCTAGTCTAAATGAAACTAATCATTTTAGAGGTCAATCCCTAGATCTTGGGAGAAAGAATGCTGCTGCAAGTTCTTCCAGAAACTCAGATATCGACCATGCTCTAAGTCAGGCCTCTAGTTGCGGAAGCATTTCAGATGCTGAGTCTTTCTTTTATGAACAAAATTACGCCAAGGATGCGACACGAGTTACTAAACTTCCACCATCAAATAGGCAGGAAAACATTAACCTTGAACTGGAAAAGTTGAGAATTGAACTAAGACATGCACAAGGAATGCATGCAGTTGCTCAAAGTGAGAACATTGATGCATCACAAAAGCTGAATGAACTAAACAAGAGAAGATTAGAAGAATCCATGAAAATGAAGGATATTATTGCGAAGGAAGAGATGGCCAAGGAATTAGCGAATCAAGAAAGAGAGAAATATGAAGCTGCAGCAAGAGAAGCTACATATTTGAAAGAATGTGCTGAAAGAGAAGCTTCAGAAAGAAAAGAAACAGAATTTAAAGCTATCCGTGCTGCTAAAGAGAAAGAAAAACTTGAGAATGCTCTGAGTGGCTCCACGCCTCAGTACCGAATGTTTACATGGGATGAAATAGTTTCAGCTACTTCATCTTTCTCTGAAGATCTTAGAATTGGAATGGGAGCATATGGAATGGTTTATAAGTGCACTTTGCATCACACAACTGTTGCTGTTAAAGTTCTCCACTCCAATGGAAACCGCAAAAGCAAGCAATTCCAACAAGAGTTAGAGATATTGAGCAGGATTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCCTGATCACGGATGCCTTGTGTATGAATACATGGAAAATGGTAACTTGGAGGATAGACTACTCCAGAAAAAAAGTGATAGCCCAATCCCATGGTTTGATAGGTTTAGAATAGCTTGGGAAGTTGCGTCCGCTCTTTCCTTTCTTCACAGCTCAAAGCCACAACCTATCATCCATCGTGACTTGAAACCCGCAAACATCTTGCTTGATGGTAACCTTGTCAGCAAGATTGGTGATGTTGGCCTTTCTACAATCCTTGACTCAGATGAATTATCTGCCATGTATAAGGACACCGCGCCTGTTGGAACACTCAGCTACATTGATCCTGAGTATCAAAGGAGTGGTTTAATATCTACGAAATCTGATGTTTACGCATTTGGATTAGTTATCTTACAGTTATTGACAGCAAAACCAGCAATAGCACTTACTCATATGGTTGAAACAGCAATTGATGGTGGTAATTTAGCAGATATATTGGATCCAAAAGCAGGATCATGGCCACTGCAAGAGACACTAGACTTAGCTCGGTTAGCATTGAGTTGTGCGGAGATGCGGCGTAAGGATCGGCCTGATTTGAAAGATCAGGTGCTACCAATGTTAGAGAGGTTGAAAGAAGTTTCTGATATGGCTCATCGCTCTGCCTCGATAGTTACTATACCTAGACCTCCTAACCATTTTATATGCCCAATACTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCTGACGGATATACATACGATCGCAATGCAATTGAAAAGTGGCTTCAAGAGAATGACAAATCACCAATGACAAATATGGTTTTACCTCATAAGTATCTAATTCCTAATTACACACTTCTATCTGCAATTTTGGAGTGGAAAACCTGA 2391 0.4019 MDRIQEADENNKSLVVALAIKGNKKSKYVTQWALDKFVHEGISIFKLIHVRAVIKGVPTPMGDVLPLSQVRNDVATSFKREVEWQTNQMLLPFKSLCEQRKVHVDVVVIESDDVATAVAEEVGRDAITKLVLGASSSGIFRSKHKGMSAKISVCTPRFCTVYAVSKGKLSIRPSDTEIDGSIIDNTSEISFSSSSSSNYTSTSQTDSGSVASCNALHSYAMATRRVKAHSSVDQTLLSTSPSLNETNHFRGQSLDLGRKNAAASSSRNSDIDHALSQASSCGSISDAESFFYEQNYAKDATRVTKLPPSNRQENINLELEKLRIELRHAQGMHAVAQSENIDASQKLNELNKRRLEESMKMKDIIAKEEMAKELANQEREKYEAAAREATYLKECAEREASERKETEFKAIRAAKEKEKLENALSGSTPQYRMFTWDEIVSATSSFSEDLRIGMGAYGMVYKCTLHHTTVAVKVLHSNGNRKSKQFQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLQKKSDSPIPWFDRFRIAWEVASALSFLHSSKPQPIIHRDLKPANILLDGNLVSKIGDVGLSTILDSDELSAMYKDTAPVGTLSYIDPEYQRSGLISTKSDVYAFGLVILQLLTAKPAIALTHMVETAIDGGNLADILDPKAGSWPLQETLDLARLALSCAEMRRKDRPDLKDQVLPMLERLKEVSDMAHRSASIVTIPRPPNHFICPILQDVMDDPCVAADGYTYDRNAIEKWLQENDKSPMTNMVLPHKYLIPNYTLLSAILEWKT* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5452 796 Coils Coil 365 399 - -
Mal2g5452 796 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 12 795 - -
Mal2g5452 796 Pfam Protein kinase domain 449 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5452 796 CDD STKc_IRAK 452 710 - -
Mal2g5452 796 PANTHER OS02G0152300 PROTEIN 12 795 - -
Mal2g5452 796 SMART Ubox_2 732 794 IPR003613 GO:0004842|GO:0016567
Mal2g5452 796 Coils Coil 403 423 - -
Mal2g5452 796 MobiDBLite consensus disorder prediction 190 209 - -
Mal2g5452 796 Coils Coil 312 353 - -
Mal2g5452 796 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 728 796 IPR013083 -
Mal2g5452 796 ProSiteProfiles U-box domain profile. 728 796 IPR003613 GO:0004842|GO:0016567
Mal2g5452 796 SUPERFAMILY RING/U-box 728 795 - -
Mal2g5452 796 Gene3D Phosphorylase Kinase; domain 1 424 518 - -
Mal2g5452 796 Gene3D Transferase(Phosphotransferase) domain 1 519 725 - -
Mal2g5452 796 SMART serkin_6 446 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5452 796 CDD STK_N 15 167 - -
Mal2g5452 796 Pfam U-box domain 730 795 IPR003613 GO:0004842|GO:0016567
Mal2g5452 796 SUPERFAMILY Protein kinase-like (PK-like) 427 701 IPR011009 -
Mal2g5452 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
Mal2g5452 796 ProSiteProfiles Protein kinase domain profile. 446 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5452 796 MobiDBLite consensus disorder prediction 237 268 - -
Mal2g5452 796 ProSitePatterns Protein kinases ATP-binding region signature. 452 473 IPR017441 GO:0005524
Mal2g5452 796 Gene3D HUPs 7 146 IPR014729 -
Mal2g5452 796 CDD RING-Ubox_WDSUB1_like 733 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5452 Mal-Chr2 131451708 131456842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5452 13 796 U-box Gene Family AT4G25160 52.812 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mal2g5452 PK_Tyr_Ser-Thr 2.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5452 - - gsj:114409387 1194.49