Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5433 ATGTTCATGTTCTTTTTTATATCTTCAATTTTCTCAATAGCCACATCAAGAAAAGGACCTTCCTCAAACAACATTGATTGGTGGTGCAATTTAACACCACATCCTAAGCCATGCAAACACTACACAACTCAAATGAACAATCATTTCAAAATCAAACATAGAGTTGAATTCAGGGAAATGCTTGTTCAATTAGCCTTAAAACAAGCTCTTATCATGCAAAAAGAAGCACAAGAAAATTCTCATCAACAAAACTCATTGGTGGAGCATAAAACTGTTCATGGTGATTGCATGAAACTGTTTGAAAACACAATCTTTCATCTCAATCGTACACTTGAAGGCTTAAACAATGCAAACAAAAATTGTTCACCAAATGATGCACAAACATGGCTCACAACTTCTCTCACAAACATTGAAACTTGTAAAAGTGGAGCTTTGGAACTCAATGCTCAAGATTTTAATTTTATTGTGCAAAACAATGTCATTGAGATGATCAGGAACATCTTAGCCATCAATATGCATTTCCTGAAACATAAAAAAGAAGCTGAAGAAGGGTCATTTCCAAGTTGGTTTTCTAGGAATGAAAGGAAGCTTTTGCAATCTAATTCACCAGTAAAGTTCAATCTTGTGGTGGCAAAAGATGGTTCTGGACAATACAAGACTGTGCAAGCTGCTTTGAATGCTGCTGCTAAGAGAAAATATAAGACAAGATTTGTAATACATGTGAAGAAAGGTGTTTACAGAGAGAACATTGAGGTTGCTGTTCATAATGATAACATTATGCTTGTTGGTGATGGAATGCAAAATACCATAATAACAAGTTCTAGAAGTGTTCAAGGTGGTTTTACCACTTATAGCTCTGCAACAGCTGGTATTGATGGACTTCACTTCATTGCACGTGACATAACCTTCCAAAATACCGCTGGTCCTCACAAGGGTCAAGCTGTGGCGCTCCGATCAGCCTCAGATCTCTCCGTCTTCTACCGGTGTGCTATATCGGGTTACCAAGACACCCTCATGGCTCATGCACAACGTCAATTCTACAGACAATGCTTCATCTATGGCACCGTAGACTTCATATTTGGCAACGCCGCAGTGGTATTCCAAAATTGTAAGATTTTCGCAAGAAAGCCTTTAGATGGCCAAGCAAACATGATCACGGCCCAAGGTCGTGGTGATCCATTCCAAAACACTGGAATTTCATTCCACAATTGTCAAATTAGGGCTGCATCAGATCTAAAGCCTGTTGTTGGCAAGTACAAAACCTACTTGGGCAGGCCTTGGCAACAATACGCAAGAGTTATGGTGATGAAAACTTTCATGGACACATTAGTGAGCCCATTAGGTTGGTCTCCATGGGGTGATACTGATTTTGCTCAAGACACATTGTATTATGGAGAGTATGAGAATTATGGACCTGGTTCATCAACAGCAAACAGAGTAAAATGGCCTGGTTATCATGTGATAACAAACCCAAATGAAGCATCAAAGTTTACCGTTGCTGGTCTTCTTGCTGGCCCAACATGGTTGGCTACTACTGCTGTGCCATTTACATCTGGTCTTTGA 1563 0.3948 MFMFFFISSIFSIATSRKGPSSNNIDWWCNLTPHPKPCKHYTTQMNNHFKIKHRVEFREMLVQLALKQALIMQKEAQENSHQQNSLVEHKTVHGDCMKLFENTIFHLNRTLEGLNNANKNCSPNDAQTWLTTSLTNIETCKSGALELNAQDFNFIVQNNVIEMIRNILAINMHFLKHKKEAEEGSFPSWFSRNERKLLQSNSPVKFNLVVAKDGSGQYKTVQAALNAAAKRKYKTRFVIHVKKGVYRENIEVAVHNDNIMLVGDGMQNTIITSSRSVQGGFTTYSSATAGIDGLHFIARDITFQNTAGPHKGQAVALRSASDLSVFYRCAISGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCKIFARKPLDGQANMITAQGRGDPFQNTGISFHNCQIRAASDLKPVVGKYKTYLGRPWQQYARVMVMKTFMDTLVSPLGWSPWGDTDFAQDTLYYGEYENYGPGSSTANRVKWPGYHVITNPNEASKFTVAGLLAGPTWLATTAVPFTSGL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5433 520 Gene3D - 201 520 IPR012334 -
Mal2g5433 520 Gene3D Invertase/pectin methylesterase inhibitor family protein 20 174 IPR035513 -
Mal2g5433 520 CDD PMEI-like_3 27 176 - -
Mal2g5433 520 Pfam Pectinesterase 207 505 IPR000070 GO:0030599|GO:0042545
Mal2g5433 520 ProSitePatterns Pectinesterase signature 2. 352 361 IPR033131 -
Mal2g5433 520 SUPERFAMILY Pectin lyase-like 203 519 IPR011050 -
Mal2g5433 520 PANTHER PECTINESTERASE 1 519 - -
Mal2g5433 520 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 171 IPR035513 -
Mal2g5433 520 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 171 IPR006501 GO:0004857
Mal2g5433 520 PANTHER PECTINESTERASE 1 519 - -
Mal2g5433 520 SMART PMEI_2 20 170 IPR006501 GO:0004857
Mal2g5433 520 Pfam Plant invertase/pectin methylesterase inhibitor 24 170 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5433 Mal-Chr2 130968867 130971175 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5433 28 520 Carbohydrate Esterase AT5G51490 56.548 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5433 K01051 - gmx:100806133 805.053