Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5427 ATGGCCATAAAACATCAAGGAAACAATTCCCTCTTAAAACATTGTTGTTCATCAAGGCGAGTTATAACCTTGATACAAAAAGTAACCGCAGAAGTTATTGGTACATATTTTCTAGTCTTTGCTGGTTGTGGTGCTGTAGCAGTGAATAAAATCCATGGCTCAATCACTTTTCCAGGTATTTGTATCACATGGGGATTGATTGTAACTGTCATGTGTTACTCTGTTGGTCATATCTCTGGTGGCCTCTTCAACCCTGCTGTTACCATCACCTGGGCTATCTTTCGTCGAATCACGATTAAAGAAGCTCCATTGTACATTGCTGCTCAGTTACTTGGGTCTACACTTGCAAGTGTAACATTGTCTCTAATGTTTGACATCACCCCTGAATCTTATTTCGGAACTGTACCAGTCGGATCAGTTGGTCAATCTTTAGTTTTGGAAATCATCATAAGTTTTCTTTTGATGTTTGTCATTTCAGCTGTTACTACAGATGATAGAGCGGTAGATGATTCCGCAAGTATTGCGGTTGGAATGACTTTGACGTTGAATCTTTTTATTGCTGGGCCGGTGTCAGGAGCATCTATGAACCCAGCAAGAAGTATTGGTCCTGCAATTGTGATACATATTTACAAAGGGTTGTGGATTTATATAGTTGGTCCAATTATTGGAGCAATAGCTGGAGCACTTGCTTATAATTTTCTTAGATCAGCATACAAGCCAGCTTCAGAATCAACAGAAGAAAAGCCAGCTTCAGAATTAACAACAGACAAGCCAGCTTCAGATTTTGTGTAA 792 0.3952 MAIKHQGNNSLLKHCCSSRRVITLIQKVTAEVIGTYFLVFAGCGAVAVNKIHGSITFPGICITWGLIVTVMCYSVGHISGGLFNPAVTITWAIFRRITIKEAPLYIAAQLLGSTLASVTLSLMFDITPESYFGTVPVGSVGQSLVLEIIISFLLMFVISAVTTDDRAVDDSASIAVGMTLTLNLFIAGPVSGASMNPARSIGPAIVIHIYKGLWIYIVGPIIGAIAGALAYNFLRSAYKPASESTEEKPASELTTDKPASDFV* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5427 263 PANTHER AQUAPORIN NIP4-1-RELATED 13 244 - -
Mal2g5427 263 PANTHER AQUAPORIN NIP2-1 13 244 IPR034294 -
Mal2g5427 263 CDD MIP 26 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal2g5427 263 Pfam Major intrinsic protein 22 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal2g5427 263 Gene3D Glycerol uptake facilitator protein. 2 248 IPR023271 -
Mal2g5427 263 MobiDBLite consensus disorder prediction 242 263 - -
Mal2g5427 263 SUPERFAMILY Aquaporin-like 20 239 IPR023271 -
Mal2g5427 263 TIGRFAM MIP: MIP family channel proteins 30 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal2g5427 263 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal2g5427 263 PRINTS Major intrinsic protein family signature 26 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal2g5427 263 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal2g5427 263 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal2g5427 263 PRINTS Major intrinsic protein family signature 64 88 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal2g5427 263 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5427 Mal-Chr2 130797715 130798506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5427 16 246 Major Intrinsic Protein MIP AT5G37820 63.793 9.78e-106 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5427 K09874 - gmx:100791338 341.273