Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5406 ATGAAAAAAAGAGTAAACAAACCAAATCAAACTCCAACAAACATGTCATGTAATTGTTCACCAACAAGAACAACAACATGTGTTATTGTTCTTCATGTGATTGTTTTATTCATAACATTAACCTTAACATCATCAAAAACAACAACCTTTGATTCAGCAACAACCTTAAACAATTTCAAACACTCCAACATCATTTCTGATCCAAAAAACTTCCTTTCAAATTGGTCACTTTCATCTTCACCTTGTTTATGGCAAGGTATCACTTGTTCACTTTCCGGTGAAGTAACCACCGTGAACCTCACCGGAGCTTCACTTTCCGGCCAAAGTTTCAACCTTTACACCTTCACTTCAATACCCTCTTTGCAAAATCTTCTTTTGCATGGAAATTCATTCACTTCTTTCAACCTCTCTGTTTCAAAACCTTGCTCTCTTATCACTCTTGATCTTTCTTCCACCAATTTCTCAGGCCCTTTCCCTTTTGAAAATTTTGTTTCTTGTTATAGTCTTAGTTACCTAAACTTGTCTAGAAATTTGATAACTTCAACAACAAAGAATCATATAGGGTTTGGTAATGGTGGTTTTTCTTCTTTGGTTCAACTTGATATGTCTAGAAACATGTTTTCTGATGTTGGTTTTGTTGTTGAAGTTGTTACAAAGCTTGAGAGTTTGGTTTTTGTTAATTTTTCCGACAACAGAATCTATGGTCAAATCAGTAATTCACTTGTTCCTGCTGTGAATTTGTCAACTTTGGATTTGTCTCATAATTTGTTGTTTGGGAAATTACCCTCTAAAATTGTTGGTTATAGTGTTGAAATTTTGGATCTTTCAAGCAACAATTTTTCATCAGGGTTTTCTGAGTTTGATTTTGGGGAGTGTAAGAAACTTGTTTGGTTGAGTTTATCTCACAATGTGATATCTGATTTTGAGTTTCCAACAAGTTTGAAAAATTGTCAAATGTTGGAAAGTTTGGATCTTTCTCAAAATCAATTTAAGATGAAGATTCCTGGTGCTGTTCTTGGTGAGTTGAGGAATTTGAAGGAACTTTATTTAGGGAATAATCGTTTTTACGGAGAAATATCTAAGGAGCTTGGAAGTGTTTGTGGAAGTTTGGAAATTCTTGATCTTTCTGTGAATAAGCTTGCTGGTGAGTTTCCTATGGTTTTTGGAAAATGTTCATCTTTAAAGAGTCTTAACCTAGCTAAGAATTATCTGTATGGTAATTTTCTTGAAAATGTTGTTACCAAACTTTCTAGTCTTAGGTATCTCTCCGTGTCATTCAATAACATAACCGGAGATGTTCCTTTGTCAATTGTTGCAAATTGTACACAGCTTCAAGTTCTTGACCTAAGTTCGAACGCCTTCACCGGAAACGTTCCTTCGGTGTTTTGTCCTTCAAAATTGGAGAAGTTGCTGCTAGCTGATAATTACCTTTCAGGGAATGTGCCTGTGAAACTCGGCGAATGCAAGAGTTTGAGAACTATTGATTTTAGCTTCAACAATTTGAGTGGTTCAATACCTTTAGAAGTTTGGTTTTTGCCTAATCTTTCTGACTTGATTATTTGGGCAAATAGTCTCACTGGTGAGATTCCTGAAGGAATTTGTGTCAATGGAGGGAACCTTGAGACATTGATTCTTAACAACAATTTCATTTCTGGTTCAATTCCCAAGTCCATTGCAAATTGTACCAACATGATTTGGGTTTCGCTTGCTAGTAACCGCATTACCGGAGTAATACCCGTTGGTATCGGGAATTTGAATGAACTTGCTATTCTCCAATTAGGTAACAATTCTCTTGTTGGAGAGATTCCTCCCGAGATTGGAATGTGTAAGAGATTGATATGGTTGGATTTGACCAGCAATAATCTCACCGGTACTATTCCATTCGAGCTTGCAAATCAAGCTGGATCGGTTATTCCGGGGAGTGTTTCGGGTAAGCAATTTGCATTTGTGAGAAATGAAGGCGGAACTAATTGTCGAGGCGCTGGAGGACTAGTTGAGTTTGAGGATATAAGGGCAGAGAGACTCGAAGATTTTCCTATGGTTCATTCTTGTCCATTAACAAGAATATATTCTGGTTATACAGTTTATACTTTTACCACCAATGGAAGCATGATTTACCTTGACCTTTCCTACAATTTCTTGTCAGGGACTATTCCGGAAAATTTGGGTGCAATGTCCTATTTGCAGGTCTTGAATCTAGGACACAATAGGCTCAATGGAAAAATTCCTGAAAGCCTTGGTGGTTTAAAACCTATAGGAGTGCTTGATTTATCTCATAATAACCTTCAAGGATTCATCCCTGGATCATTACAATCTCTATCATTTCTCAGTGACTTTGATGTGTCGAATAATAACCTTATTGGATCGATTCCTTCTGGAGGTCAGCTAACAACTTTCCCAGCATCTAGATACGAAAACAACTCAAACCTTTGTGGTGTTCCGTTACCAAAATGCGGCGCTTCAAATCACACGTTAGCTGTTCGTAATCGTACGTGGAAGAAGAAGCAGCAACCTATTGCAGTTTTGACAGTCATGTGCCTCATTTTCTTTCTCTTGTTTGTTGTTGTGCTTGTATTGGCTTTGTTTCGAGTGCAAAAGACTCGGAAGAAGGATGAATTGAGAGAAAAATATATAGAAAGTCTTCCAACTTCTGGTAGCAATAGTTGGAAGCTTTCTAGCTTTCCGGAGCCTCTAAGCATCAACGTTGCTACGTTCGAAAAACCTCTGCGCAAGTTGACGTTCGCGCATCTCCTCGAGGCTACTAACGGTTTCAGCTCCGAAAGCTTGATAGGTTCGGGAGGTTTCGGTGAAGTCTATAAGGCTAAGATGAAAGACGGCAGTGTTGTTGCTATCAAGAAACTCATTCGTGTCACAGGTCAGGGAGACAGAGAGTTCATAGCCGAAATGGAAACGATCGGGAAGATTAAGCACCGGAACCTTGTTCCACTTCTTGGTTACTGTAAAGTTGGAGATGAAAGGCTACTTGTGTATGAGTACATGAAATACGGAAGTTTAGAAACTGTTCTACATGAGAGAATCAATAGTTCAAAGCTTTCTTGGGAAACAAGAAAGAAGATAGCACTAGGATCAGCAAGAGGTCTTGCATTTCTTCATCATAGTTGCATACCTCATATTATACATAGAGACATGAAGTCAAGCAATATTCTTCTCGACGAAAATTTCGAGGCTAGAGTTTCAGATTTCGGTATGGCAAGATTGGTTAATGCTCTCGACACTCATCTCACAGTTAGCACACTTGCAGGAACACCAGGTTATGTACCACCTGAATACTATCAGAGTTTTCGATGCACGGCGAAAGGCGATGTTTACAGTTACGGTGTCATACTGCTAGAACTTCTATCAGGGAAGAGACCAATCAACTCGTCCGAGTTCGGTGATGATAACAATCTTGTTGGATGGTCTAAGAAGCTTTATAGAGAAAGAAAAATTAGTGAAATACTTGATTCTGACTTGGTTATGCAAACTTCTAGTGAAGGTGAACTTCTTCAATATTTGAGAATTGCTTTTGAATGTTTAGAGGAAAGACCGTACCGGCGTCCGACAATGATACAAGTGATGGCAATGTTTAAAGAGCTTCAAGTTGATACAGATACTGATAGTGTTGCTGATGGTTTCTCTATGAAAGACAATGTTATTGATGAAGCATGA 3669 0.3821 MKKRVNKPNQTPTNMSCNCSPTRTTTCVIVLHVIVLFITLTLTSSKTTTFDSATTLNNFKHSNIISDPKNFLSNWSLSSSPCLWQGITCSLSGEVTTVNLTGASLSGQSFNLYTFTSIPSLQNLLLHGNSFTSFNLSVSKPCSLITLDLSSTNFSGPFPFENFVSCYSLSYLNLSRNLITSTTKNHIGFGNGGFSSLVQLDMSRNMFSDVGFVVEVVTKLESLVFVNFSDNRIYGQISNSLVPAVNLSTLDLSHNLLFGKLPSKIVGYSVEILDLSSNNFSSGFSEFDFGECKKLVWLSLSHNVISDFEFPTSLKNCQMLESLDLSQNQFKMKIPGAVLGELRNLKELYLGNNRFYGEISKELGSVCGSLEILDLSVNKLAGEFPMVFGKCSSLKSLNLAKNYLYGNFLENVVTKLSSLRYLSVSFNNITGDVPLSIVANCTQLQVLDLSSNAFTGNVPSVFCPSKLEKLLLADNYLSGNVPVKLGECKSLRTIDFSFNNLSGSIPLEVWFLPNLSDLIIWANSLTGEIPEGICVNGGNLETLILNNNFISGSIPKSIANCTNMIWVSLASNRITGVIPVGIGNLNELAILQLGNNSLVGEIPPEIGMCKRLIWLDLTSNNLTGTIPFELANQAGSVIPGSVSGKQFAFVRNEGGTNCRGAGGLVEFEDIRAERLEDFPMVHSCPLTRIYSGYTVYTFTTNGSMIYLDLSYNFLSGTIPENLGAMSYLQVLNLGHNRLNGKIPESLGGLKPIGVLDLSHNNLQGFIPGSLQSLSFLSDFDVSNNNLIGSIPSGGQLTTFPASRYENNSNLCGVPLPKCGASNHTLAVRNRTWKKKQQPIAVLTVMCLIFFLLFVVVLVLALFRVQKTRKKDELREKYIESLPTSGSNSWKLSSFPEPLSINVATFEKPLRKLTFAHLLEATNGFSSESLIGSGGFGEVYKAKMKDGSVVAIKKLIRVTGQGDREFIAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEYMKYGSLETVLHERINSSKLSWETRKKIALGSARGLAFLHHSCIPHIIHRDMKSSNILLDENFEARVSDFGMARLVNALDTHLTVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKRPINSSEFGDDNNLVGWSKKLYRERKISEILDSDLVMQTSSEGELLQYLRIAFECLEERPYRRPTMIQVMAMFKELQVDTDTDSVADGFSMKDNVIDEA* 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5406 1222 SUPERFAMILY L domain-like 269 630 - -
Mal2g5406 1222 SUPERFAMILY L domain-like 53 335 - -
Mal2g5406 1222 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 31 1207 - -
Mal2g5406 1222 ProSitePatterns Protein kinases ATP-binding region signature. 930 953 IPR017441 GO:0005524
Mal2g5406 1222 ProSiteProfiles Protein kinase domain profile. 924 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5406 1222 SMART LRR_typ_2 342 366 IPR003591 -
Mal2g5406 1222 SMART LRR_typ_2 585 609 IPR003591 -
Mal2g5406 1222 SMART LRR_typ_2 441 464 IPR003591 -
Mal2g5406 1222 SMART LRR_typ_2 725 749 IPR003591 -
Mal2g5406 1222 SMART LRR_typ_2 416 440 IPR003591 -
Mal2g5406 1222 SMART LRR_typ_2 118 141 IPR003591 -
Mal2g5406 1222 SMART LRR_typ_2 512 536 IPR003591 -
Mal2g5406 1222 SUPERFAMILY L domain-like 697 823 - -
Mal2g5406 1222 SUPERFAMILY Protein kinase-like (PK-like) 908 1203 IPR011009 -
Mal2g5406 1222 Gene3D - 642 699 - -
Mal2g5406 1222 SMART serkin_6 924 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5406 1222 Pfam Leucine Rich repeat 417 431 IPR001611 GO:0005515
Mal2g5406 1222 Pfam Protein kinase domain 925 1194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5406 1222 ProSiteProfiles Leucine-rich repeat profile. 294 315 IPR001611 GO:0005515
Mal2g5406 1222 Gene3D Phosphorylase Kinase; domain 1 888 999 - -
Mal2g5406 1222 Pfam Leucine rich repeat N-terminal domain 53 90 IPR013210 -
Mal2g5406 1222 Pfam Leucine rich repeat 727 786 IPR001611 GO:0005515
Mal2g5406 1222 Gene3D Ribonuclease Inhibitor 51 165 IPR032675 -
Mal2g5406 1222 Gene3D Transferase(Phosphotransferase) domain 1 1000 1217 - -
Mal2g5406 1222 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1045 1057 IPR008271 GO:0004672|GO:0006468
Mal2g5406 1222 Gene3D Ribonuclease Inhibitor 195 819 IPR032675 -
Mal2g5406 1222 Pfam Leucine Rich Repeat 539 561 IPR001611 GO:0005515
Mal2g5406 1222 Pfam Brassinosteroid receptor island domain 635 699 IPR045381 -
Mal2g5406 1222 PANTHER SERINE/THREONINE-PROTEIN KINASE BRI1-LIKE 1 31 1207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5406 Mal-Chr2 130175476 130179144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5406 50 1221 Receptor kinase-like Gene Family AT1G55610 60.320 0.0 1400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mal2g5406 Pkinase 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5406 - - gmx:100779072 1667.51