Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5405 ATGGCATCCCAATCCTCTAACGTCTCCGCCACTTCACAAGATCAAGGCGATTCTTCTAACTCAAAACAAGTGGTGATCGTGAAGGAGATTGAACATGATCAACCATCAAGTTCTAATCCCAGCAAGTTTATTGATTTCGTGAAGCTATCGAAAGACGATTCGGTTCTCAGGTCGGAGGTGCAAGAGCACAATTTTTTTGGCTCTTTTCAGGTCGGTTCATCATCCCGTTTTCCTAGTAACAACAATGAATGGAAAGATGAGAGCAACAATGAAGAGAAGAATTCAGATTCAAAGTCTTTTTCATGCTGTTTTTGCAAGAGAAAATTTTCTACTTCACAAGCCTTAGGGGGACACCAGAATGCACATAAGGCTGAACGTGCGCTAGAAAAACAACGTAAACAAAGGTATGAAAGTGGTATTTTAGGTTTAGGGCAACCTCACTTTAACCCTTATTTTAGTTATCCAAGTACACTTTTTACACCCCCTTATTTTAGGGCACTTGGGGGTAGAATGGAATCCATGATTCAAAAACCACTTTTTATTAACCCCAGGATTACTCCACATAGTTTTGGCCCTTTTGGGTATGGTAATGGTTCTTTATGTTTGCAAGAGATATTAAACCCTTCTCTTGTTAATTTGAGAAATATGGAGGGTAGTAATAGCAATACTGGGGTTGGAATTCTAGGTACTGGGGGTGCAAATACTTTAAGGATTGAAGACGGTGCAAATAATAAAATTGGTGCTATTCTAAAGTTTGAAGATTCTACTAAAAATAATGTTGGTGCAAGTTCAAATTCAAACCTAGAAAAGAAAATTATTATGGCTCCCACTTCTATCAAAGATGATATTCATGATCAATCAAAATCCAACATTGAAGAAGAACCATCCGATAAATCTCCTGGCCTTGATTTATCACTGAAGCTTTAA 927 0.3786 MASQSSNVSATSQDQGDSSNSKQVVIVKEIEHDQPSSSNPSKFIDFVKLSKDDSVLRSEVQEHNFFGSFQVGSSSRFPSNNNEWKDESNNEEKNSDSKSFSCCFCKRKFSTSQALGGHQNAHKAERALEKQRKQRYESGILGLGQPHFNPYFSYPSTLFTPPYFRALGGRMESMIQKPLFINPRITPHSFGPFGYGNGSLCLQEILNPSLVNLRNMEGSNSNTGVGILGTGGANTLRIEDGANNKIGAILKFEDSTKNNVGASSNSNLEKKIIMAPTSIKDDIHDQSKSNIEEEPSDKSPGLDLSLKL* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5405 308 MobiDBLite consensus disorder prediction 73 97 - -
Mal2g5405 308 Gene3D Classic Zinc Finger 79 140 - -
Mal2g5405 308 SUPERFAMILY beta-beta-alpha zinc fingers 96 128 IPR036236 -
Mal2g5405 308 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Mal2g5405 308 MobiDBLite consensus disorder prediction 1 25 - -
Mal2g5405 308 PANTHER ZINC FINGER PROTEIN KNUCKLES 72 308 - -
Mal2g5405 308 MobiDBLite consensus disorder prediction 279 300 - -
Mal2g5405 308 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
Mal2g5405 308 PANTHER ZINC FINGER PROTEIN JAGGED 72 308 IPR045320 GO:0003700
Mal2g5405 308 MobiDBLite consensus disorder prediction 279 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5405 Mal-Chr2 130164635 130165561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5405 95 155 C2H2 Transcription Factor Family AT5G01860 49.180 2.71e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5405 - - mtr:MTR_3g011970 345.125