Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5403 ATGGCTGGGATTGATGAGAATCTTGCACTTAATGGTGATTGGGGTCTTCCTAGTCCAAGTCCAAGGACCCTTTTTTCTAGAATGCTAGAAGAAGAAAATAATAATGTAATAAGACCGAATTCGGAACATTCTGGGAGCGGTAGAACCGAGGCACAAGATGGTGATTCCGGTACCCAATTGAGCGATACGAGTTATCCAACCGAGAACAAGTCGAGTTCGCGGGGTGGTCTTGTTGATAGAATTGCTGCTAGAACTGGATTTAATGCTCCGCGGTTGAATACCGAGAGCATTAGATCTACTGAACTTTCGCTCAATTCTGAGATTCAGTCACCTTACTTGACTATACCGCCTGGTCTTAGTCCTACAACACTTTTAGATTCTCCTGTGTTCCTTGCAAATTCATTGGCACAGCCATCTCCAACAACAGGAAAGTTTCCATTTGTTTCAAACGGCAACATCCGCAGCACAGAATTATCATCAGATGTTCAAGAAAAATCTAAACATAATGGCTTTAATGATATGTATGCATCTTCCTTTGCTTTCAAGCCTACAACAGATTCGGGCCCCTCTTTTTATCAAAGTGCTGGTAGAAATATAAATCCAACTACACTCTCTCAGCAATCCCTTCATTGTATTGAAGCTTCAGTTCAGTCTCAAAGAGTTGATGCGGTCAAAGTTCAAACTGAGAACAAAAGTAGCCTCCATCTTAAGGCAGAGTTCTCCGACTCGCCACCTCAAAAAGACAATTCTACTCAAATGGAAGAGCAAGCAGATGAAGAGGGAGAACAAAGAGTCAACGGAGACTCGTTGGTTGCTGGTGTTGGTGGTACTCCATCGGAAGACGGATATAATTGGAGAAAATATGGCCAAAAGCAAGTTAAGGGTAGTGAGTACCCTCGAAGTTACTACAAGTGTACTCATTCAAATTGTCCGGTTAAAAAGAAAGTAGAACGTTCTCACGAGGGCCATATAACGGAGATAATCTATAAGGGGGCACACAACCACCCGAAACCTCCTCCAAGTCGCCGGTCAGGCATAGGGTCAGCTAACCCTCATGCTGACATGCAAGTGGACAATCCTGAACATGGTGAACCACAGGGTGGCAGCGGCGACCTAGGCTGGGCTAATGTACAGAAGGGAAATGTAGCTGGAGCTGGTAATTGGAAGCATGACAACCTTGAAGCGACATCATCTGTCAACCCTGAGTACGGTAACCAGTCCACCAATCTGCAAACTCAAAATGGTACTACTCACATTGATTCAGGAGATGCAGTGGATCGCTCGTCTACATTTTCTAATGAAGAGGAAGATGATCAAGGCACTCATGGTAGTGTATCATTAGGTTATGATGCGGAAGGAGATGAATCAGAGTCTAAAAGAAGGAAACTGGAATCATACGCCGAGATGAGTGGAGCTACTAGAGCCATTCGTGAGCCTAGAGTTGTTGTTCAGACTACCAGCGAAGTAGATATCCTCGATGATGGTTATCGGTGGCGGAAATATGGACAGAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACCAATGCAGGGTGCACTGTAAGGAAGCATGTGGAGAGAGCATCACATGACCTTAAATCTGTGATCACTACATACGAGGGAAAGCACAATCATGATGTCCCCGCTGCTCGTTCCAGCAGTCACGTCAATGCAAACGCTTCTAACGCTGCTCAAGGACAAGCTTCTGGTCTCCTCCAAAACCATATGCATAGACCTGAACAATCTCAAGTTCACAATGGCATGGGAAGGCCTTCACTTGGTTCATTCAACCTTCCCGGGAGACAGCAGCTAGGTCATCCACACAGTTTCTCCTTCGGCATGAATCAACACCTGTCGAACCTTGCAATGTCAGGATTGGGCCCTTCGCAAGCAAAGCTTCCTGGAATGCCTATGAATCCATTCATGGTGCAACAACAACAACAACAACGCGCTGCTAATGAAATGGGGTTCATGTTACCAAAGGGAGAACCAAATGTGGATGCTAATCCTGAACGCGCCGGCCTTAACATGCGTAATGGTTCATCATCAATGTATCAAGATATTATGAATCACATGCCTCTTGGACCTCACATGTAA 2109 0.4509 MAGIDENLALNGDWGLPSPSPRTLFSRMLEEENNNVIRPNSEHSGSGRTEAQDGDSGTQLSDTSYPTENKSSSRGGLVDRIAARTGFNAPRLNTESIRSTELSLNSEIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFPFVSNGNIRSTELSSDVQEKSKHNGFNDMYASSFAFKPTTDSGPSFYQSAGRNINPTTLSQQSLHCIEASVQSQRVDAVKVQTENKSSLHLKAEFSDSPPQKDNSTQMEEQADEEGEQRVNGDSLVAGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHSNCPVKKKVERSHEGHITEIIYKGAHNHPKPPPSRRSGIGSANPHADMQVDNPEHGEPQGGSGDLGWANVQKGNVAGAGNWKHDNLEATSSVNPEYGNQSTNLQTQNGTTHIDSGDAVDRSSTFSNEEEDDQGTHGSVSLGYDAEGDESESKRRKLESYAEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHVNANASNAAQGQASGLLQNHMHRPEQSQVHNGMGRPSLGSFNLPGRQQLGHPHSFSFGMNQHLSNLAMSGLGPSQAKLPGMPMNPFMVQQQQQQRAANEMGFMLPKGEPNVDANPERAGLNMRNGSSSMYQDIMNHMPLGPHM* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5403 702 MobiDBLite consensus disorder prediction 452 467 - -
Mal2g5403 702 MobiDBLite consensus disorder prediction 328 469 - -
Mal2g5403 702 SMART WRKY_cls 279 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal2g5403 702 SMART WRKY_cls 492 551 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal2g5403 702 MobiDBLite consensus disorder prediction 583 611 - -
Mal2g5403 702 MobiDBLite consensus disorder prediction 227 288 - -
Mal2g5403 702 MobiDBLite consensus disorder prediction 227 251 - -
Mal2g5403 702 Gene3D WRKY domain 479 545 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal2g5403 702 MobiDBLite consensus disorder prediction 391 428 - -
Mal2g5403 702 MobiDBLite consensus disorder prediction 549 568 - -
Mal2g5403 702 MobiDBLite consensus disorder prediction 1 77 - -
Mal2g5403 702 SUPERFAMILY WRKY DNA-binding domain 277 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal2g5403 702 SUPERFAMILY WRKY DNA-binding domain 484 552 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal2g5403 702 Pfam WRKY DNA -binding domain 493 549 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal2g5403 702 Pfam WRKY DNA -binding domain 280 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal2g5403 702 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 625 IPR044810 GO:0003700
Mal2g5403 702 Gene3D WRKY domain 273 339 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal2g5403 702 MobiDBLite consensus disorder prediction 554 568 - -
Mal2g5403 702 ProSiteProfiles WRKY domain profile. 487 552 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal2g5403 702 MobiDBLite consensus disorder prediction 27 74 - -
Mal2g5403 702 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 88 625 - -
Mal2g5403 702 ProSiteProfiles WRKY domain profile. 280 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5403 Mal-Chr2 130117200 130121620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5403 1 697 WRKY Transcription Factor Family AT5G56270 50.136 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal2g5403 WRKY 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5403 K18835 - gmx:100127395 1059.67