Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5384 ATGTCGATAGTACTTAGAAAATTGTGGGAAATAATGTTAATGTTAAGACGAAATCAAACAACATCCTCAGATGAACAACAACAACAAGAAGAAGAAGTGTTGACGTGTGGTGATATGGGTGAATTGGATCAACTACCAAGTGACATCTTGGTACAAATATTGAGACTTTTGGGTCCCAAAGAAGTTGCAAAACTGAGTGTGATTTGCAAGTCTTTGAAGTTTTCTGTATCTGATAATCGTTTATGGCTTCACTTCCTTCAGACTCATCAATCTGATCCATCTTGGGATTCTGTGTTTTTTGCTGAAACTAATTTGACTTCTGGCTACCCTCTTCCATCCTTTGTTGGCCAGAGGCCGCAGTTATCATTCAAACATATTTATGGACAGAGAGCAATGGTTCCTGGTGCTATTATCATTGATGGCGGTTCTGGCTATTGCAAATTTGGTTGGAGCAAATATGCTTGTCCGTCAGGGCGATCCGCAACATTTTTGGAATTTGGCAACATTGAGTCGCCAATGTATACTAGGCTCCGACATTTTTTCGCAACTATTTATAACAGGATGCAGGTGAAGCCAAATAAACAACCGGTTATTGTTTCTGTACCAATATGCCATTATGATGATACTGAATCAGCCAGAGCATCGAGACGACAACTTAAAGAATCGATTTATGCTTCCCTGTTCGACTTGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGCGACTCTAGCTCTGTATGCTGCAAAACGAACTTCTGGAATAGCTGTTAATATAGGTTTTCAAGTGACATCAATAGTTCCAATTTTTAATGGTAAAGTAATGCGCGAAGTCGGTGTGGAAGTTGTGGGACTGGGAGCACTGAAAGTTACAGGATTTCTTAAGGAGAAGATGCAACAGAACAACCTAAATTTTCAATCATTGTACACTGTTCGCGCTTTGAAAGAGAATCTATGCTATGTTGCACTTGATTATGAAGCTGAGCTATTAAAAGAAAACACACAAGCATCATTTCAAGCTACAGGGGATGGACTATTTACACTTTCAAAAGAGCGGTTTCAGACAGCTGAGATTTTATTCAAGCCACATCTTGCTGGAGTGCAAGCCATGGGTTTACACCAGGCCATAGCTCTTTGTATGGAGAATTGCCATTCTGCAGAATTACCAGGCGACAACGATTGGTACAAGACTGTAGTTTTATCAGGAGGAACCGCATGTTTGCCAGGTTTGGCAGAAAGATTAGAGAAGGAACTCCATGGATTACTTTCTCCATACATGTCAAATGGAATTAGAGTCATACCTCCTCCATACGGTGTCGATACTCCATGGTTTGGAGCAAAGATGATTGGCAATTTGAGCACATTTCCTGGTCCTTGGTGTGTGGAAAAAAAGAATTTCCGCCAGAAGCCTAGGCTCGGCCTCATATGGTGA 1428 0.4104 MSIVLRKLWEIMLMLRRNQTTSSDEQQQQEEEVLTCGDMGELDQLPSDILVQILRLLGPKEVAKLSVICKSLKFSVSDNRLWLHFLQTHQSDPSWDSVFFAETNLTSGYPLPSFVGQRPQLSFKHIYGQRAMVPGAIIIDGGSGYCKFGWSKYACPSGRSATFLEFGNIESPMYTRLRHFFATIYNRMQVKPNKQPVIVSVPICHYDDTESARASRRQLKESIYASLFDLNVPAVCAVNQATLALYAAKRTSGIAVNIGFQVTSIVPIFNGKVMREVGVEVVGLGALKVTGFLKEKMQQNNLNFQSLYTVRALKENLCYVALDYEAELLKENTQASFQATGDGLFTLSKERFQTAEILFKPHLAGVQAMGLHQAIALCMENCHSAELPGDNDWYKTVVLSGGTACLPGLAERLEKELHGLLSPYMSNGIRVIPPPYGVDTPWFGAKMIGNLSTFPGPWCVEKKNFRQKPRLGLIW* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5384 475 PANTHER ACTIN 88 472 IPR004000 -
Mal2g5384 475 CDD NBD_sugar-kinase_HSP70_actin 137 281 - -
Mal2g5384 475 Gene3D - 241 440 - -
Mal2g5384 475 SMART actin_3 134 465 IPR004000 -
Mal2g5384 475 Gene3D - 179 466 - -
Mal2g5384 475 SMART fbox_2 45 85 IPR001810 GO:0005515
Mal2g5384 475 Pfam Actin 183 463 IPR004000 -
Mal2g5384 475 PANTHER MACRONUCLEAR ACTIN 88 472 - -
Mal2g5384 475 Pfam F-box domain 42 83 IPR001810 GO:0005515
Mal2g5384 475 ProSiteProfiles F-box domain profile. 39 85 IPR001810 GO:0005515
Mal2g5384 475 SUPERFAMILY F-box domain 35 99 IPR036047 GO:0005515
Mal2g5384 475 SUPERFAMILY Actin-like ATPase domain 250 459 IPR043129 -
Mal2g5384 475 SUPERFAMILY Actin-like ATPase domain 135 256 IPR043129 -
Mal2g5384 475 Gene3D Actin; Chain A, domain 4 284 368 - -
Mal2g5384 475 Gene3D - 29 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5384 Mal-Chr2 129758153 129765441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5384 183 471 Cytoskeleton Gene Families AT3G12110 30.976 3.04e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5384 K16616 - gmx:100791973 767.689