Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5363 ATGGTAGTATTTGATAGTCATTATAAGAGAAAAATGACCATCAGAAGGATCAACAAGACAGTGAGGAGGATTCGTGTTAGAGGTGGAAATGTGAAGTGGAGAGCTATGAGATTGGATACCGGTAACTTCTCATGGGGAAGTGAAGCCGTCACTCGCAAGACCCGTTTGCTCGATGTGGTTTACAATGCTTCCAACAATGAGTTGCTCAGAACTCAGACCCTTGTGAAGAGTGTTATTGTGCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAACACTATGGTGTTGAAATCGGCAGGAAAAAGAAAATTATTGCTATAAAATGGGGCAATGGCTTGGCTCAAAAGTTGGAAGCTGAGGCTAAGCTGAAGGAACTAGAAGTTGAGAAGGAAAAGCCTTTTTGGTTGTGTGTGTATAAAATTTTGTCTTATAATCATTTAGATAATATGAGAAAAACCAAAAAAAAAAAAAATTGA 480 0.3937 MVVFDSHYKRKMTIRRINKTVRRIRVRGGNVKWRAMRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELLRTQTLVKSVIVQVDAAPFKQWYLQHYGVEIGRKKKIIAIKWGNGLAQKLEAEAKLKELEVEKEKPFWLCVYKILSYNHLDNMRKTKKKKN* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5363 159 PANTHER 40S RIBOSOMAL PROTEIN S8 17 109 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mal2g5363 159 Pfam Ribosomal protein S8e 16 88 IPR022309 -
Mal2g5363 159 Gene3D - 11 133 - -
Mal2g5363 159 CDD Ribosomal_S8e_like 18 107 - -
Mal2g5363 159 PANTHER CMV 1A INTERACTING PROTEIN 1 17 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5363 Mal-Chr2 128790090 128795253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5363 18 135 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 72.358 1.90e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5363 K02995 - sly:101267653 177.178