Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5360 ATGGAATCCTCATTTAACAATGAGGAAATGAGAAAAACATTGAATTCAAACCATTTGCCCATGGCTAGAAGAGGTCTTGGATCCAAGGGAAGCAAGATACAACTCTTAGCTAATCATTTTCGAGTTCGCCTGAGCAAGAATGATGGCTACTTCTATCACTACAATGTTGCTTTATGTTATCAAAATGGACACCCGGTTGCAGTGAAAAGTGTTGGGAGAAAAGTCATCGACAAACTTTGTGAAACATATGATGTATTAAGAAACAAGAATTTTGTATATGATGGTGAGAAAAGTTTATTCACTCTTGGTTCTCTACATCACAAAAAGCAGGAATTCATTGTTGTGTTAGAGAAAGTTTCATCAATGAGCAACCCTGCTGCAGCAACCAAGAGAATGAAGCGTCAATCTCGGTCCAAATCTTTTAAGGTTGAGATTAGTCATGTAGCTAAAATTCCATTACAAGAAATTGCAGATGCGTTAAGAGGTCAGGAATCTGAACACTATCAGGAAGCCTTCAATTTCCTTGACACAATACTGAGGCAGAATGCAGAAAAACAGGGATGTCTCCGTATTCATCGATCGTACTTTCATGATAATCCAAGGAATATTACTAACCTAGACGGTGGTATTCAATGTTGTCGCGGCATCCATTCAAGCTTCCGAGTCACACAAAGAGGTTTATCTCTCAATGTTGATGTGTCAACTACATTACTTATAAAGCCTGGTCCTGTAGTGGATTTCCTTCTCCAGAATCAGAATGTTCAGAAACCAAACATGATTGATTGGACCAAGGCAAAAAGAATGTTGAAAAAACTTAGAATCAAGGCTAACGATACAGAGGGCAGAATCACTGGACTAAGTGAAAAGTCCTGCAGGACACAAAAATTTTTAATTAAACATGGAAATGATGCTAATGGTGAAGTGCAGTCAAGTGAAATAACAATTTATGAATACTACAAACACCACAAAAAGACTGAACTTTGTTATTCTGTTGATATGCCATGCATCAATGTTGGGAAACCAAAGAAGCCAATTTATTTTCCTATGGAGTTATGCACATTAGTCTCATTGCAGCGATACACTAAGGCATTGTCGCATAAGCAAAGGGCTCAACTGATGTTGGAATCAAGGACTAATCCTCGTGAAAGGAAAGAATCTTTGCAACATTCTTTAAAAAGCAGCAGATATGGCGATGAGCCTATGCTTCGCTCTTTAGGGATTACGATTGAACCTTCCTTTACGCAAGTTGATGGTCGTGTCTTGCAAGCTCCAACACTTGTTTTCGGAAGGAGGCAAAGCTTTTCCCCGCGAAATGGGAGCTGGAATTTGAATGACAAGAAACTAGTTGAACCTGTGGAGATAAAGCGTTGGGCCATTGTAAACTTTTCATCACAGTGCGATATGAAACTTCTATGCAGTATGATTAAAAAATGTTCTGAAATGAAAGGGATGCGCATGGATCCTCCGTTCGACATATTTGAAGAGGATAGTCGCCATAAGAATAAGTCACCATTTGTCAGAGTTGCTCGAATGTATGAAATGGTAAAGGCCAAACTGCCGGGACCCCCTACACATCCTCTAGCTCAGCTTCTTTTGTGTATTCTTCCACTTGGCAAGAATTGCGAGATTTATGGTCCTTGGAAAAGAAGATGTCTTGTTGATGAAGGGATTGCAACTCAATGCATTGCTCCAACAAAAATTAATGATCATTACTTTACTAATGTTCTGTTGAAAATTAATGCAAAGCTTGGTGGGATGAATTCCTTTTTGTTAACCGAGGTTGAGCATTCGATACCACTATTTTCAAACATACCTACATTGGTTATTGGAATGGATGTTTCACATGGATCTCAAGGTCAATTAGATACACCATCGATTGCTGCGGTTGTGAGCTCAAGATGTTGGCCTCAAATTTCTCGTTACAGAGCTGTTGTCCGCACTCAGTCGTCAAAAGTAGAGATGATTCAGTCTCTATTCAAGCCTGTTTCTGATACTAAGGATGATGGTATCATCAGTGAGTTGCTTAAAGACTTCCAAACAACTTCAGGAGTGAAGCCTCAACAAATTATAATTTTCAGAGACGGCGTGAGTGAAACACAGTTCAACCAACTCCTCAACATTGAATTGGATGGAATTATAAAGGCATGTAAGCATTATGATAAAAGTTGGTGTCCAAAGTTTACTTTGATTGTTGCTCAGAAGAATCATCATACTAGATTCTTCAAAGCCAATGCTCCTCAAGAAAATGTTTCACCTGGAACTGTTATTGATAACACTATATGTCATCCCAAAAACAATGATTTCTACATGTGTGCACATGCTGGGAGGATTGGTACAAGTCGTCCTACTCATTACCATGTTTTATATGATGAAATTGGGTTCTCAGCAGATAATTTGCAAGAATTTGTACATTCTCTATGTTATGTGCACCAGAGGAGTACAAATGCCATATCAATAGTTGCACCAATTTATTATGCTGACCTAGCTGCTGCTCAGATAGCACAATTTATAAAATTTGATGAGACAGAGACTATTTCCAGCCACAATTTACACATACATGAGTTACCACGTCTTCATGAACAAGTCGCCGATACTATGTTCTTTTGTTAA 2610 0.3866 MESSFNNEEMRKTLNSNHLPMARRGLGSKGSKIQLLANHFRVRLSKNDGYFYHYNVALCYQNGHPVAVKSVGRKVIDKLCETYDVLRNKNFVYDGEKSLFTLGSLHHKKQEFIVVLEKVSSMSNPAAATKRMKRQSRSKSFKVEISHVAKIPLQEIADALRGQESEHYQEAFNFLDTILRQNAEKQGCLRIHRSYFHDNPRNITNLDGGIQCCRGIHSSFRVTQRGLSLNVDVSTTLLIKPGPVVDFLLQNQNVQKPNMIDWTKAKRMLKKLRIKANDTEGRITGLSEKSCRTQKFLIKHGNDANGEVQSSEITIYEYYKHHKKTELCYSVDMPCINVGKPKKPIYFPMELCTLVSLQRYTKALSHKQRAQLMLESRTNPRERKESLQHSLKSSRYGDEPMLRSLGITIEPSFTQVDGRVLQAPTLVFGRRQSFSPRNGSWNLNDKKLVEPVEIKRWAIVNFSSQCDMKLLCSMIKKCSEMKGMRMDPPFDIFEEDSRHKNKSPFVRVARMYEMVKAKLPGPPTHPLAQLLLCILPLGKNCEIYGPWKRRCLVDEGIATQCIAPTKINDHYFTNVLLKINAKLGGMNSFLLTEVEHSIPLFSNIPTLVIGMDVSHGSQGQLDTPSIAAVVSSRCWPQISRYRAVVRTQSSKVEMIQSLFKPVSDTKDDGIISELLKDFQTTSGVKPQQIIIFRDGVSETQFNQLLNIELDGIIKACKHYDKSWCPKFTLIVAQKNHHTRFFKANAPQENVSPGTVIDNTICHPKNNDFYMCAHAGRIGTSRPTHYHVLYDEIGFSADNLQEFVHSLCYVHQRSTNAISIVAPIYYADLAAAQIAQFIKFDETETISSHNLHIHELPRLHEQVADTMFFC* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5360 869 Gene3D - 598 869 IPR036397 GO:0003676
Mal2g5360 869 SMART Piwi_a_2 530 838 IPR003165 GO:0003676
Mal2g5360 869 CDD Piwi_ago-like 400 832 IPR045246 -
Mal2g5360 869 ProSiteProfiles PAZ domain profile. 282 356 IPR003100 GO:0005515
Mal2g5360 869 SUPERFAMILY PAZ domain 236 396 IPR036085 GO:0005515
Mal2g5360 869 Pfam Mid domain of argonaute 435 486 IPR032473 -
Mal2g5360 869 Gene3D paz domain 235 360 - -
Mal2g5360 869 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 13 868 - -
Mal2g5360 869 SMART DUF1785_2 189 241 IPR014811 -
Mal2g5360 869 Pfam Piwi domain 531 838 IPR003165 GO:0003676
Mal2g5360 869 ProSiteProfiles Piwi domain profile. 530 838 IPR003165 GO:0003676
Mal2g5360 869 SUPERFAMILY Ribonuclease H-like 529 836 IPR012337 -
Mal2g5360 869 Pfam Argonaute linker 1 domain 191 239 IPR014811 -
Mal2g5360 869 Pfam Argonaute linker 2 domain 382 427 IPR032472 -
Mal2g5360 869 Gene3D - 420 591 - -
Mal2g5360 869 Coils Coil 269 289 - -
Mal2g5360 869 Pfam N-terminal domain of argonaute 32 179 IPR032474 -
Mal2g5360 869 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 13 868 - -
Mal2g5360 869 CDD PAZ_argonaute_like 241 355 - -
Mal2g5360 869 Pfam PAZ domain 245 372 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5360 Mal-Chr2 128351898 128359057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5360 15 869 Eukaryotic Initiation Factors Gene Family AT5G43810 35.039 9.09e-163 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5360 K11593 - pop:7486850 1075.46