Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5312 ATGTCTCAAACTCATCACAACAATCATGAAGAACATCATCAAATAGTTGAACAAACTTCAGAGAATTGTGTCTGCTCAATATGCTACAATAAGAGACCAAAACTTGATTGGACAAGAAGAGACTTCACATATGCTGAATTGCATGCAGCAACACAAGGTTTTTCAATAAAGAACTTTCTATCAGAAGGTGGATTTGGTTCTGTCTACAAAGGGGAGATTCTTGGACAGAAGATTGCTGTTAAGCAATGTTTACATGCAAGTCACAAACAAGAGAAGGAGTTTAAATCTGAAGTTGATGCACTAAGCAAAGCAAGACATGAGAATGTTGTCATGTTTCTTGGATCTTGTTCTGAAGGAAACCATAGGCTTCTTGTTTATGAATATGTTTGCAACGGTTCATTGGACCAGCATTTATCACAACACTCTCGTAAACCTCTTTGCTGGCAAGATAGGGTGAAAGTAGCTAATGGAGCTGCTAAGGGATTGCTATACCTTCATCAGAACAACATCATACATAGAGATATAAAAACAAACAACATTCTTCTTTCACATGATTATGAAGCTATGCTAGGTGATTTTGGTTTGGCTAAAATTGCAAGTGAAGAATTCTCATGCTCAATAGAATGTCCTGGAAATCTGGCATATTGGGCACCAGAATATGCAGCATATGGTAAAGTATCAAATAAAACAGATGTATATTCTTTTGGAGTGGTTCTAGTTGAGCTAATAACTGGAATGAGGACTACAGACAAAAGACTTGGAGGAAAGGGTCTATTGGGATGGGCAAGATCATTACTAAGAGAAGGGAATTGTCAAAAACTTGTCGATGGAAGGATAATGGATTCACATGACTGTCATCAAATCCTTTGGATGAGCCGTCTAGCTGGAAATTGTCTTAACAAGGATCCTCATAAACGATTGGATATGAGTACGGTGGTCAAAGCCTTAATACATATAGAAGAAGGTTGCAGTTGCTGCATTGTGGGAAAAGACAGTAGCACCCTTGACATGTCAGGCTATTCTAAATCAAAAATTGATATGCAAGACTCTTCAGAATCAGATGGTGAAAATTGA 1074 0.3771 MSQTHHNNHEEHHQIVEQTSENCVCSICYNKRPKLDWTRRDFTYAELHAATQGFSIKNFLSEGGFGSVYKGEILGQKIAVKQCLHASHKQEKEFKSEVDALSKARHENVVMFLGSCSEGNHRLLVYEYVCNGSLDQHLSQHSRKPLCWQDRVKVANGAAKGLLYLHQNNIIHRDIKTNNILLSHDYEAMLGDFGLAKIASEEFSCSIECPGNLAYWAPEYAAYGKVSNKTDVYSFGVVLVELITGMRTTDKRLGGKGLLGWARSLLREGNCQKLVDGRIMDSHDCHQILWMSRLAGNCLNKDPHKRLDMSTVVKALIHIEEGCSCCIVGKDSSTLDMSGYSKSKIDMQDSSESDGEN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5312 357 Gene3D Phosphorylase Kinase; domain 1 34 128 - -
Mal2g5312 357 SMART serkin_6 54 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5312 357 ProSiteProfiles Protein kinase domain profile. 54 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5312 357 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 348 - -
Mal2g5312 357 PANTHER OS01G0253100 PROTEIN 3 348 IPR045271 GO:0004714|GO:0006468
Mal2g5312 357 Pfam Protein tyrosine and serine/threonine kinase 56 316 IPR001245 GO:0004672|GO:0006468
Mal2g5312 357 Gene3D Transferase(Phosphotransferase) domain 1 129 328 - -
Mal2g5312 357 SUPERFAMILY Protein kinase-like (PK-like) 30 316 IPR011009 -
Mal2g5312 357 PIRSF ILK 3 333 - -
Mal2g5312 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5312 Mal-Chr2 126726677 126729565 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5312 42 323 Trihelix Transcription Factor Family AT5G38560 45.085 5.49e-75 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mal2g5312 PK_Tyr_Ser-Thr 4.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5312 - - mtr:MTR_3g011630 659.833