Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5300 ATGACCCCACTCATAAAACAAGGCTACAGAAAACCTATCACTGAAAAGGATGTTTGGAAGCTAGACAAATTGGATCAAACAGATATATTAAATGAAAAGTTCCAAAAGTGTTGGATGTCAGAATTTCAAAGCTCTAACCCTTGGCTTTTAAGAGCATTAAACAAAAGCTTAGGGAAAAGGTTTTGGTTTGGAGGCATCTATAAGATTGGTTTTGATCTTTCTCGATTTGTTGCGCCAATTTTGCTGAACCGTCTCTTAGATTCAATGCAAAATGGAGATCCGTCTTGGATCGGTTACATTTACGCCTTCTCGATGCTCGTTGGAGTGTCATTTGGTCTTCTATGTGACGCACAATATTTCCAGAATATTATGCGTGTCGGTTTTCAACTTAGATCAACATTGGTGGCTGCTATATTCAGAAAATCTTTAAGGCTAACTCATGAAAGTAGAAAGAAGTTCTCATATGGGAAGCTTATGAATATGATAGCAACAGATGCCATTACATTACAGATAATATGTACACATCTTCATGGACTATGGTCAGCACCATTTCGCATCATCATAGCTATGGTTCTCCTATACCAGCAACTAGGTGTTGCTTCACTTATTGGTTCACTAATGATAGTTCTCCTTTTTCCTCTACAGACATTTGTGTTTAGCAAAATGAGTAAATTGACAAAGGAAGGACTGCAACAGACAGACAAAAGGGTTGGTCTGATGAATGAAATTCTTTCTACCATGGATACAGTAAAATGTTACGCATGGGAAACAAGCTTTCAGTCTAGAATTCAAAGTATTCGACATGAAGAACTTTCATGGTTCCGCAAAGCAGATCTTCTCTATGCGTTAAACAGTTTTATATTGGACAGCATTCCAGTTCTTGTGACAGTAACTTGCTTTGGAATGTTTACTTTACTTGGTGGAGAATTAACACCTGCAAGAGCATTCACCTCACTATCTCTGTTTGTGGTTTTGCGCATTCCTTTAAATATGCTTCCAGATTTACTAAGTCAGATAGCAAATGCAAATGTGTCATTGCAACGTTTGGAGGAACTGTTTTCGGCCGAGGAACGGGATTTAAAACAAAATCCACCAATTGTTCCAGGACTTCCAGCCATCTCAATAAAAAATGGATACTTTTCATGGGATCCTAAGGAAGAGAAGCCCACATTATCAAATATCAATGTTGAAATTCCATTTGGAAGCTTAGTTGCAATCACTGGAGGTACTGGAGAAGGGAAAACATCACTTATTTCCGCAATGCTCGGAGAGCTACCTCTTGTATCCGATGGAAATGTTACAGTCAGAGGCACTGTTGCTTATGTTCCTCAGATTTCATGGATTTACAATGCTACAGTTCGTGACAATATATTATTCGGTTCAAATTTCGATCATGGACGGTATTCGAAGGCTATCGATGTCACTTCTTTGGAGCATGATCTCAACTTTTTACCTGATCGCGATTTTACGGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAGCAAAGAGTTTCTTTAGCTAGGGCTGTATACTCAAATTCTGATGTATATATATTTGATGATCCTTTAAGTGCTCTTGATGCTCACATTGCTCAAGAGGTTTTCAGGAACTGTATAAAGGAAGGGTTGCAAGGAAAAACCAGAGTTCTTGTCACCAACCAGCTTCATTTTCTCCCTCAGGTGGATAAAATTATTCTTGTTAGTGAAGGAATGATTAAGGAGCAAGGAACGTTCGAGGAGTTGTTGAAATGTGGGCCTCTATTTCAGAAACTAATGGAAAATGCCGGGAAAATGGAACAAGAAGTAGATAGTAACAAAGATAGTGATAGTCATGACAAGAATGGTGTTTTGCCAAATGATGTAAGCTATGAGAAGAATGGAAAACATCAAAAGTGGGTACTTGTTCAGAAAGAAGAGCGGGAGACAGGTGTGGTAAGCTGGAAAGTTTTAACGAGGTACACATCTGCTTTGGGAGGACTGTGGGTAGTTTCTATACTTTTTGCATGCTACACATTAACAGAAGCCCTTCGAATTTCGAGTAGTACATGGTTAAGTATGTGGACATCTCAAGATTCAACTGCAGCTTCTCGTAATGGATATTTTCTTTTCATCTATGCAATATTCTCATTTGGACAGGTATCTGTGGCACTTGCAAACTGTTATTGGTTGATCATTTCAAGTCTTCGTGCTGCAAAACGATTGCACGATGAAATGCTAGATAAAGTTCTACGTGCTCCAATGATATTCTTCCAGACTAATCCTGTCGGCCGCATAATTAATAGATTTGCAAAAGACACAGGGGACATAGATTCCAAAGTTTATAATTTGGTGAATGAGGTTCTAGGACAACTCTGGCAACTACTTTCGACATTTGTTCTTATAGGCACCGTGAGCACCATATCCCTGTGGGCCATAATGCCACTTCTCATAGTTTTCTATCTTGCTTATATATACTATCAGAGCACATCTCGAGAAGTGAAGCGCATGGATTCCATTACAAGATCGCCAGTTTATGCACATTTTGGAGAATCATTGAACGGTTTGTCAAGCATTCGCACTTACAAAGCGCACGAAAGAATGTCACACAACAACAGAAAATTCATGGATAACAATACCAGATTTACTCTTGCGATAGTTAGTTCAAACCGTTGGCTAACCATAAGGTTAGAAAGTTTAGGAGGCCTCATGATTTGGTTGATAGCAACATTTGCTGTCTTACAAAATGCAAGATCTGAAAACCCTACAACGGTTGCATCTTCAATGGGTCTACTTCTCAGTTACACATTGAACATAACAAATCTTTTGAGTAGCACACTTAGACAAGCAAGTGTAGCTGAAAACAGTCTAAATTCGGTTGAGCGCGTTGGCACATATATAGATTTAGAAACTGAGGGTCAAAGTATAATTGAGACGAACCGTCCACCACCAGGATGGCCAACAAAAGGATCAATTGAGTTTGAGAATGTTGTTTTGAGTTATAGGCCGGAACTTCCTCCGGTCTTGCACGGATTGTCCTTTGTAGTGCCTTCAATGGAGAAAATAGGTGTAGTTGGAAGAACTGGTGCAGGAAAGTCTAGCATGCTCAATGCGTTATTTCGGATTGTGGAACTACAAAGTGGAAGAATCATTATTGATGGATGTGATATTTCTACGTTCGGACTAGCAGATTTGCGAAGAGTTCTTACTATCATACCACAGTCGCCCGTTCTTTTCTCCGGAACTGTTCGTTTCAATCTTGATCCATTTAATGAACACAATGATGCTGACGTATGGGAAGCTTTGGAAAGGGCACACATGATGGAAGTAATAAGAAGAAATCAGTTTGGTCTAGATGCTCAGGTTTCTGAAGGAGGAGACAATTTCAGTGTTGGACAGAGGCAGCTATTAAGTTTAGCAAGAGCATTGCTAAGAAGATCAAAGGTTCTTGTCCTTGATGAAGCTACTGCTTCTGTAGATGTTAGAACAGATGCTCTAATACAAAAAACTATCCGACAAGAGTTTCATTCCTGCACAATGCTCATCATTGCACATAGATTGAATACAGTTATCGACTGCAATCGGATTCTGTTGCTAGATGCTGGCAAGGTTCTTGAATACAATTCGCCTAAGGAGCTCTTACAAAATGAAGAAACTGCATTCTACAAAATGGTTCAAAGTACTGGTCCTGCAAATGCTGAGTATTTATGTAGCTTAGTATTTGGAAGAGAACAATTCAGATGA 3729 0.3923 MTPLIKQGYRKPITEKDVWKLDKLDQTDILNEKFQKCWMSEFQSSNPWLLRALNKSLGKRFWFGGIYKIGFDLSRFVAPILLNRLLDSMQNGDPSWIGYIYAFSMLVGVSFGLLCDAQYFQNIMRVGFQLRSTLVAAIFRKSLRLTHESRKKFSYGKLMNMIATDAITLQIICTHLHGLWSAPFRIIIAMVLLYQQLGVASLIGSLMIVLLFPLQTFVFSKMSKLTKEGLQQTDKRVGLMNEILSTMDTVKCYAWETSFQSRIQSIRHEELSWFRKADLLYALNSFILDSIPVLVTVTCFGMFTLLGGELTPARAFTSLSLFVVLRIPLNMLPDLLSQIANANVSLQRLEELFSAEERDLKQNPPIVPGLPAISIKNGYFSWDPKEEKPTLSNINVEIPFGSLVAITGGTGEGKTSLISAMLGELPLVSDGNVTVRGTVAYVPQISWIYNATVRDNILFGSNFDHGRYSKAIDVTSLEHDLNFLPDRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDAHIAQEVFRNCIKEGLQGKTRVLVTNQLHFLPQVDKIILVSEGMIKEQGTFEELLKCGPLFQKLMENAGKMEQEVDSNKDSDSHDKNGVLPNDVSYEKNGKHQKWVLVQKEERETGVVSWKVLTRYTSALGGLWVVSILFACYTLTEALRISSSTWLSMWTSQDSTAASRNGYFLFIYAIFSFGQVSVALANCYWLIISSLRAAKRLHDEMLDKVLRAPMIFFQTNPVGRIINRFAKDTGDIDSKVYNLVNEVLGQLWQLLSTFVLIGTVSTISLWAIMPLLIVFYLAYIYYQSTSREVKRMDSITRSPVYAHFGESLNGLSSIRTYKAHERMSHNNRKFMDNNTRFTLAIVSSNRWLTIRLESLGGLMIWLIATFAVLQNARSENPTTVASSMGLLLSYTLNITNLLSSTLRQASVAENSLNSVERVGTYIDLETEGQSIIETNRPPPGWPTKGSIEFENVVLSYRPELPPVLHGLSFVVPSMEKIGVVGRTGAGKSSMLNALFRIVELQSGRIIIDGCDISTFGLADLRRVLTIIPQSPVLFSGTVRFNLDPFNEHNDADVWEALERAHMMEVIRRNQFGLDAQVSEGGDNFSVGQRQLLSLARALLRRSKVLVLDEATASVDVRTDALIQKTIRQEFHSCTMLIIAHRLNTVIDCNRILLLDAGKVLEYNSPKELLQNEETAFYKMVQSTGPANAEYLCSLVFGREQFR* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5300 1242 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 668 950 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g5300 1242 CDD ABCC_MRP_domain1 373 573 - -
Mal2g5300 1242 CDD ABC_6TM_ABCC_D1 63 349 IPR044746 GO:0140359
Mal2g5300 1242 ProSitePatterns ABC transporters family signature. 499 513 IPR017871 GO:0005524
Mal2g5300 1242 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 1238 - -
Mal2g5300 1242 SUPERFAMILY ABC transporter transmembrane region 47 349 IPR036640 GO:0005524|GO:0016021
Mal2g5300 1242 CDD ABC_6TM_ABCC_D2 666 962 IPR044726 GO:0140359
Mal2g5300 1242 ProSitePatterns ABC transporters family signature. 1124 1138 IPR017871 GO:0005524
Mal2g5300 1242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 977 1220 IPR027417 -
Mal2g5300 1242 Gene3D ABC transporter type 1, transmembrane domain 39 353 IPR036640 GO:0005524|GO:0016021
Mal2g5300 1242 Gene3D ABC transporter type 1, transmembrane domain 628 968 IPR036640 GO:0005524|GO:0016021
Mal2g5300 1242 Pfam ABC transporter transmembrane region 67 326 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g5300 1242 Pfam ABC transporter transmembrane region 668 917 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g5300 1242 Gene3D - 970 1223 IPR027417 -
Mal2g5300 1242 MobiDBLite consensus disorder prediction 602 623 - -
Mal2g5300 1242 Pfam ABC transporter 391 526 IPR003439 GO:0005524
Mal2g5300 1242 SUPERFAMILY ABC transporter transmembrane region 665 967 IPR036640 GO:0005524|GO:0016021
Mal2g5300 1242 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 373 597 IPR003439 GO:0005524
Mal2g5300 1242 MobiDBLite consensus disorder prediction 602 617 - -
Mal2g5300 1242 SMART AAA_5 400 580 IPR003593 -
Mal2g5300 1242 SMART AAA_5 1013 1192 IPR003593 -
Mal2g5300 1242 Coils Coil 332 359 - -
Mal2g5300 1242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 596 IPR027417 -
Mal2g5300 1242 Gene3D - 354 621 IPR027417 -
Mal2g5300 1242 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 62 341 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal2g5300 1242 CDD ABCC_MRP_domain2 985 1205 - -
Mal2g5300 1242 Pfam ABC transporter 1004 1152 IPR003439 GO:0005524
Mal2g5300 1242 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 987 1221 IPR003439 GO:0005524
Mal2g5300 1242 PANTHER ABC TRANSPORTER C FAMILY MEMBER 11-RELATED 1 1238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5300 Mal-Chr2 126422134 126434464 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5300 367 784 Calmodulin-binding Proteins AT2G36910 23.493 7.14e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5300 - K05665 mtr:MTR_3g011840 2188.3