Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5296 ATGGCAAAAAAACTTATACTCATTTCCATCCTTAGATTTCTTAGCTTCATGACCCTTTTCACAAAATCAATTGCACAATCTCCAAACTATGTAGGTGATAATTGTCACAACTCAACTGAACAATCACTTACAAGTACATACAAATCCAACCTTAATAAAATCCTTTCATTGCTTTCTTCTGATGCAATTGTAAGCAAAGGATATAATCACACAAGCATAGGAGACAACACAGTTGATGCTGTCTATGGTCTCTATGATTGTAGGGGTGATGTCACAGGATCTTTTTGTCAATTTTGTGTCTCTACTGCTGCCTCAGATATTCTTCAACGCTGTCCTAATAGAGCCTCAGCTGTTATATGGTACAACTTTTGCATTTTCAGGTATTCCAACCATAATTTCTTTGGGAACCTCACAACAAGTCCATCATGGCAAATGTTGGGGTCAAAAAACATCACTAATCCACAAGAACTTGATAAAGCTGAAGATAATATGCAAAGTTTAGTAAGTGAGGCTACTTTGGAGACCAATAAGTTGTATGCAATGAGGGAGTTCAATTTGAGTAATAGTCCTTATGAGAAAAGGTATGGATTAGTGCAGTGTAGTAGGGACCTTAGTGAGAAGCAATGTAATCAATGTTTGGAGGCTATGTTAGACAAAGTTCCTAAATGTTGTGGTACAAAGATTGGTTGGCAGGTTGTTGCTCCAAGTTGTTTAATAAAGTATGATGATTTTATGTTCTACAAGCTTATTTTTCAAACTTCTCCTCCTTTGCCTAATAATCCAGCCGAGGAAGGAGGGTCAAGTAAATCAAATACCTTGATCAAAATTATCGTCATTGTGTTGGTGGTGGCACTTGTTCTCATAAGTTGTTGTATCTTCTTCATATGGAGGCGAAATCATTCAAATAAAGATGAACTATCAGAGACAATTCTTATATCTCATCATGGCCATATTCAAGGAGAGGGTTCATATAATGCTGACCTCCCAATAATCCCTTTAATTTGGATTCGACGAAGCACTGATAACTTTTCCGAATTATGTAAACTAGGAGAAGGTGGATTTGGCCCTGTTTATAAGGGTAATTTAGTAGATGGAACAGAAGTTGCAATCAAAAGGCTATCTAGAACATCTGGTCAAGGTTCAGAAGAGTTCAAGAATGAAGTAATCTTTATAGCTAAATTGCAACATAGAAACCTTGTGAGACTTTTGGGTTGTTGCATTGAAGATAATGAAAAGTTGCTTGTATATGAATACATGTCAAACTCTAGCCTCGACTTTCATTTATTTGATGGACTACCATCAAAGACAATTCCTATATCTCATCATGGCCATACTCAAGGAGAGGATTCATATCATGCCGACCTCCCAATAATCCCTTTAATTTGGATTCAAGAGAGCACTAATAACTTTTCAGAATTACGTAAACTAGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGTAATTTAGTAGATGGAACAGAAGTTGCAATCAAAAGACTCTCTAGAACATCTGGTCAAGGTTTAGAGGAGTTCACAAATGAAGTAATCTTTATAGCTAAATTGCAACATAGAAATCTTGTGAGACTTTTGGGTTGCAGCATTGAGGATAATGAAAAGTTGCTTGTATATGAATACATGCCAAACTCTAGCCTCGACTTTCATTTATTTGATGAGGAAAAAAGAAAACTTCTGGATTGGAAGTTAAGACTGCACATTATTAATGGAATTGCAAAAGGACTCTCGTACCTTCATGAAGACTCTAGACTAAGAGTAATTCATAGAGACCTAAAAGCTAGTAATGTTCTTTTAGATCAAGAGATGAATCCAAAAATATCTGATTTTGGATTGGCAAGGGCATTTGAAAAAGACCAAAGTCAAGAAAATACAAAAAGAGTTGTCGGCACATATGGATACATGGCTCCAGAATACGCTATGGAAGGGTTATATTCAGTGAAATCTGATGTTTTTAGCTTTGGAGTTCTTTTATTAGAAATAATATGTGGAAAAAGGAATGGCGGATTCTATCTCGCGGAGCATGGTCAAAGTCTTCTTATATATAGTTGGAATCTTTGGTGTGAAGGAAAAAGTTTAGAATTGTTAGATCCAATATTGAAAAATACATACATAGCAAATGAAGTTATGAAATGCATCCATATTGGTTTGTTGTGCGTACAAGAAGATGCATTGGATAGACCAACCATGTCCAATGTTGTTGTCATGCTAGCAAGTGACACAATGACACTTCCCAATCCTAATCATCCTGCATTTTCAGTTGGAAGAAAAGGTGAATCCACATCAAAAGCTTCCAATAACCCTTCTGTTAATGAAGTAACAATATCAAATATTTTCCCAAGGTAA 2358 0.3596 MAKKLILISILRFLSFMTLFTKSIAQSPNYVGDNCHNSTEQSLTSTYKSNLNKILSLLSSDAIVSKGYNHTSIGDNTVDAVYGLYDCRGDVTGSFCQFCVSTAASDILQRCPNRASAVIWYNFCIFRYSNHNFFGNLTTSPSWQMLGSKNITNPQELDKAEDNMQSLVSEATLETNKLYAMREFNLSNSPYEKRYGLVQCSRDLSEKQCNQCLEAMLDKVPKCCGTKIGWQVVAPSCLIKYDDFMFYKLIFQTSPPLPNNPAEEGGSSKSNTLIKIIVIVLVVALVLISCCIFFIWRRNHSNKDELSETILISHHGHIQGEGSYNADLPIIPLIWIRRSTDNFSELCKLGEGGFGPVYKGNLVDGTEVAIKRLSRTSGQGSEEFKNEVIFIAKLQHRNLVRLLGCCIEDNEKLLVYEYMSNSSLDFHLFDGLPSKTIPISHHGHTQGEDSYHADLPIIPLIWIQESTNNFSELRKLGEGGFGPVYKGNLVDGTEVAIKRLSRTSGQGLEEFTNEVIFIAKLQHRNLVRLLGCSIEDNEKLLVYEYMPNSSLDFHLFDEEKRKLLDWKLRLHIINGIAKGLSYLHEDSRLRVIHRDLKASNVLLDQEMNPKISDFGLARAFEKDQSQENTKRVVGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGKRNGGFYLAEHGQSLLIYSWNLWCEGKSLELLDPILKNTYIANEVMKCIHIGLLCVQEDALDRPTMSNVVVMLASDTMTLPNPNHPAFSVGRKGESTSKASNNPSVNEVTISNIFPR* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5296 785 Pfam Protein tyrosine and serine/threonine kinase 473 739 IPR001245 GO:0004672|GO:0006468
Mal2g5296 785 Pfam Protein tyrosine and serine/threonine kinase 347 428 IPR001245 GO:0004672|GO:0006468
Mal2g5296 785 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Mal2g5296 785 SUPERFAMILY Protein kinase-like (PK-like) 451 763 IPR011009 -
Mal2g5296 785 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 433 782 - -
Mal2g5296 785 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 434 - -
Mal2g5296 785 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Mal2g5296 785 CDD STKc_IRAK 476 741 - -
Mal2g5296 785 Gene3D - 140 246 IPR038408 -
Mal2g5296 785 Gene3D - 29 133 IPR038408 -
Mal2g5296 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 591 603 IPR008271 GO:0004672|GO:0006468
Mal2g5296 785 Coils Coil 157 177 - -
Mal2g5296 785 SUPERFAMILY Protein kinase-like (PK-like) 323 432 IPR011009 -
Mal2g5296 785 Pfam Salt stress response/antifungal 161 242 IPR002902 -
Mal2g5296 785 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Mal2g5296 785 Gene3D Phosphorylase Kinase; domain 1 312 418 - -
Mal2g5296 785 Gene3D Phosphorylase Kinase; domain 1 439 545 - -
Mal2g5296 785 Gene3D Transferase(Phosphotransferase) domain 1 546 750 - -
Mal2g5296 785 ProSiteProfiles Protein kinase domain profile. 470 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5296 785 SMART serkin_6 470 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5296 785 PANTHER PROTEIN KINASE DOMAIN 433 782 - -
Mal2g5296 785 PANTHER PROTEIN KINASE DOMAIN 20 434 - -
Mal2g5296 785 Pfam Domain of unknown function (DUF3403) 743 785 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5296 Mal-Chr2 126301325 126326767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5296 463 758 Receptor kinase-like Gene Family AT4G23230 60.811 3.53e-127 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal2g5296 PK_Tyr_Ser-Thr 5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5296 - - lja:Lj0g3v0351729.1 627.476