Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5294 ATGATAAAAAACTGTGATTGTAGCAGCAGAAGAATGCTTCATCTATGGTTATTTACCATCAAATTGATATACCTTTTCTACTTTGCTGCAGGCCAAAACAATAGCAATTCACAAGAACTACTTGAATATAGATATGCTTGTTTGGACCAATCTTCTACTCCTCCTTCTACAACATACCAAACCAACCTCAACAATTTAATCTCTTCATTATCATCGGATTCTGCTTCCAGCAATGGTTTTGGAAATAGAACTTCAGGTAGTAATCAAAATAACATGGTTTATGGACAATACCTTTGTCGTGGCGATGTTAATACAAGTCTTTGTCATTCATGTGTACAAAACTCTAGCAGATTGCTCACACAACACTGTCCAAATAATGCATCAGCAGTTTTGTGGTACCCTTTTTGTCTTCTAAGGTACTCAAATCAGAATTTCTTTGGTAACCTTACTATAAGACCAAGGATTCCTATGTTTGATGTAGCACAAAATTTAACTAGTGCTGGTGAATTTGATAGTGATGCTAGGGTTTTGATGAATGGTTTGATACAAATGGGATCACAAACACCTTTAATGTTTGGAACACATATGTTTAACATAAATGGTACTCAAAGAAGGTATGGTTGGGTACAGTGTAGCAGAGATATTACTAGTGAGGAATGCAGAACTTGTTTGAGCAATATGCTTGAGGATGTTGAAAATTGTTGTGTGGAGAAGAAAGTTTGGAGAATCTTTTCGCCAAGTTGTATTTTGATGTATGAAACTCAGCCATTCTTTGTGAATGGTACAGTTTCTGAAGCTCCTGTGCCTCAACAAGCCAATGAAAAGGATGGCACAAGGTCATGGATAATAATAATCATTGTTGTAATTGGAGCAGTAGTAGCAGCTCTAGTGGTTTTCAGCACATACTATTTCTGGTGCTTGAAACATCGAAAAGAGAGAAATTCTATGCAAGGCCATAGTCTAATGTTTTCTCAAGATCAGACAGACGTTGAGGAAACTGGAAATACAGACCTACCTATGATGCCTCTGAGCACCATTCTAAAAAGTACTGATAATTTTTCAGATCAATATAAATTAGGGAAAGGTGGATTTGGAACTGTCTACAAGGGTGTTTTAGCAGATGGAAGGGAAATTGCTGTTAAAAGGCTTTCAAAAACTTCTGCTCAAGGTGTGGAGGAATTAAAAAATGAAATAATATTGATTGCCAAACTGCAGCATCGAAACCTGGTCAGACTATTGGCTTGCTGCATTGAGCCAAATGAAAAGCTTCTTATCTATGAATACTTGCCTAATTCAAGCCTTGATTTCCACCTATTTGATATGGTGAAGGGTGCACAACTAGATTGGAAACAGCGATTAAATATTATTAATGGGATTGCCAAAGGGCTTCTATATCTCCATGAAGACTCTAGGCTCAGAGTTATTCACAGAGACTTGAAAGCTAGCAATATACTGTTAGATCATGAAATGAATCCAAAAATATCAGACTTCGGACTGGCAAGAACATTTGGAGGAGACCAAGAGGAAGCAAATACAATTAGAGTTGTGGGAACTTATGGATACATGGCTCCAGAATATGCTATGGAAGGATTATTTTCAGTGAAGTCAGATGTTTTCAGCTTTGGTGTTCTTTTGCTAGAGATCATCAGTGAAAGAAAAAACAGCAAATTCTATCTTTCAGAGCATGGCCAAAGCCTTCCCATATATGCATGGAACCTTTGGTGTAAAAGAAAAGGTTTGGAATTGATGGACCCATCGGTAGAAAAAGCATGTGTACCTGATGAATATCTGAAGTGTTTACATATTGGACTATTGTGTGTACAAGAAGATGCAGCAGATAGACCTACAATGTCAAGTGTAGTTCACATGCTTGCAAGTGACATAGTGACTCTTCCCATCCCTACACGCCCTGCATTTTCTGTTGGAAGAGCTAGAGCTGTCGTTGACCGAGAATCTTCAACTTCTATCTCTGCCAATGAAGTAACCTTGTCTGAATTGAGGCCTAGATGA 2010 0.3781 MIKNCDCSSRRMLHLWLFTIKLIYLFYFAAGQNNSNSQELLEYRYACLDQSSTPPSTTYQTNLNNLISSLSSDSASSNGFGNRTSGSNQNNMVYGQYLCRGDVNTSLCHSCVQNSSRLLTQHCPNNASAVLWYPFCLLRYSNQNFFGNLTIRPRIPMFDVAQNLTSAGEFDSDARVLMNGLIQMGSQTPLMFGTHMFNINGTQRRYGWVQCSRDITSEECRTCLSNMLEDVENCCVEKKVWRIFSPSCILMYETQPFFVNGTVSEAPVPQQANEKDGTRSWIIIIIVVIGAVVAALVVFSTYYFWCLKHRKERNSMQGHSLMFSQDQTDVEETGNTDLPMMPLSTILKSTDNFSDQYKLGKGGFGTVYKGVLADGREIAVKRLSKTSAQGVEELKNEIILIAKLQHRNLVRLLACCIEPNEKLLIYEYLPNSSLDFHLFDMVKGAQLDWKQRLNIINGIAKGLLYLHEDSRLRVIHRDLKASNILLDHEMNPKISDFGLARTFGGDQEEANTIRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISERKNSKFYLSEHGQSLPIYAWNLWCKRKGLELMDPSVEKACVPDEYLKCLHIGLLCVQEDAADRPTMSSVVHMLASDIVTLPIPTRPAFSVGRARAVVDRESSTSISANEVTLSELRPR* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5294 669 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 44 666 - -
Mal2g5294 669 ProSiteProfiles Gnk2-homologous domain profile. 41 145 IPR002902 -
Mal2g5294 669 Pfam Salt stress response/antifungal 163 254 IPR002902 -
Mal2g5294 669 Pfam Salt stress response/antifungal 52 143 IPR002902 -
Mal2g5294 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Mal2g5294 669 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Mal2g5294 669 SUPERFAMILY Protein kinase-like (PK-like) 336 624 IPR011009 -
Mal2g5294 669 ProSiteProfiles Gnk2-homologous domain profile. 152 257 IPR002902 -
Mal2g5294 669 SMART serkin_6 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5294 669 Gene3D Transferase(Phosphotransferase) domain 1 429 630 - -
Mal2g5294 669 Gene3D Phosphorylase Kinase; domain 1 314 428 - -
Mal2g5294 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 44 666 - -
Mal2g5294 669 Pfam Protein tyrosine and serine/threonine kinase 357 624 IPR001245 GO:0004672|GO:0006468
Mal2g5294 669 ProSiteProfiles Protein kinase domain profile. 353 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal2g5294 669 CDD STKc_IRAK 359 624 - -
Mal2g5294 669 Gene3D - 41 145 IPR038408 -
Mal2g5294 669 Gene3D - 157 257 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5294 Mal-Chr2 126239321 126243289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5294 45 666 Receptor kinase-like Gene Family AT4G05200 41.250 1.95e-169 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal2g5294 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5294 - - gmx:100798691 1040.41