Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5287 ATGGCTTCTGAATCATCTAGCATCTCTGCCACATCACAAAATCAAGGTGATTCTCCCCACTCAAAAAAAGTGGTGGACATAAAGGAGATTGAAGAAATTCAATCCTCAAACTCAAAATCCGACAACCCTATTGATTTCGTGAAGTTGTCAAAAGATGATTCGATTCCCGTGTCGAAGGTGCAAGAGCACAATTTTTTTTGCCCTATTCAAATTGGTTCTTCATCTTGTTTTCCTAATGACAACAATCAAGGAAAAGACGAGAGCATCAATGGAGAGAAGAATTCGGATTCAATGTCTTTCTCATGCTCCTTCTGCAAGAGACAATTTTCTACTTCACAAGCGTTGGGAGGACATCAGAACGCTCATAAGGCAGAACGTGCGCTAGAAAAGCAAAGAAAACAAAGGTATGATGGTGGTCCTTCAGGTTTAGGGCAACCTTACTTTAACCCTAATCTTAGTTATCCAAGTACTCTTTTTCCACCTTATGATTACAGGTCACTTGGGGTTAGAATGGAGTCAATGATACAAAAACCACTTTATTTTAACCCTAGAATTACCCCACATAGTTTTGGGTATAGTCATAGTGCTTTGTTGCAAGAGATGTTAAACCCTTCTCTTGTGTCATTGAAAAATAAGGGGGGTGGTAATAGCGGGTTTGGAAACCTAGGTATTGGTGGTGCAACTACTTCAAGGATTGAAGATGGTACAAATAATAAAATTGGTGCTATGCTAAAATTAGGAGATTTTTCTACAAATATTGCTTCAAGTTCAAACTCAAACATGGAAAAGCAAATTGTTTTGGCTCCTACTTCTACCAATATTGCTACAAGTTCAAGCTCAAACACAGAAAAGCAAATTATTGTGGCTCCTACGTCTACCAATGATGATGTTCATGATGAATCAAAGCTCAACAATGAAGGAGAACCCTCCAATTCTGAAACTTCTGACCTTGATTTATCACTTAAGCTTTAA 972 0.3817 MASESSSISATSQNQGDSPHSKKVVDIKEIEEIQSSNSKSDNPIDFVKLSKDDSIPVSKVQEHNFFCPIQIGSSSCFPNDNNQGKDESINGEKNSDSMSFSCSFCKRQFSTSQALGGHQNAHKAERALEKQRKQRYDGGPSGLGQPYFNPNLSYPSTLFPPYDYRSLGVRMESMIQKPLYFNPRITPHSFGYSHSALLQEMLNPSLVSLKNKGGGNSGFGNLGIGGATTSRIEDGTNNKIGAMLKLGDFSTNIASSSNSNMEKQIVLAPTSTNIATSSSSNTEKQIIVAPTSTNDDVHDESKLNNEGEPSNSETSDLDLSLKL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5287 323 MobiDBLite consensus disorder prediction 1 20 - -
Mal2g5287 323 Gene3D Classic Zinc Finger 82 139 - -
Mal2g5287 323 MobiDBLite consensus disorder prediction 115 148 - -
Mal2g5287 323 ProSitePatterns Zinc finger C2H2 type domain signature. 102 122 IPR013087 -
Mal2g5287 323 SUPERFAMILY beta-beta-alpha zinc fingers 98 128 IPR036236 -
Mal2g5287 323 ProSiteProfiles Zinc finger C2H2 type domain profile. 100 127 IPR013087 -
Mal2g5287 323 PANTHER ZINC FINGER PROTEIN KNUCKLES 71 323 - -
Mal2g5287 323 MobiDBLite consensus disorder prediction 274 294 - -
Mal2g5287 323 MobiDBLite consensus disorder prediction 1 26 - -
Mal2g5287 323 MobiDBLite consensus disorder prediction 307 323 - -
Mal2g5287 323 MobiDBLite consensus disorder prediction 122 136 - -
Mal2g5287 323 MobiDBLite consensus disorder prediction 274 323 - -
Mal2g5287 323 PANTHER ZINC FINGER PROTEIN JAGGED 71 323 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5287 Mal-Chr2 126142551 126143522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5287 88 182 C2H2 Transcription Factor Family AT5G10970 43.750 3.61e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5287 - - mtr:MTR_3g011970 437.958