Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5286 ATGGCATCCCAATCCTCTAGCACATCTGCCACTTCACAAGGTCAAGGTGATTCTTCCAACTCAAAAAAAGTGGTGATCATGAAGGAGATTGAACATGATCAACCCTCAAACTCTAATTCTAATAACAAGTCTATTGATTTCGTCAAGCTATCCAAAGACGACGCGGTTCTCAAATTAGAGGTACAAGAGCACAATTTTTTTGGTCCTATTCAAGGCGGTTCATCATCTTGTTTTTCTAATAATAACAATGAAGAAAAATATGAGAACAACAATGAAGAGAAGAATTCAGATTCAAGGTCTTTTTCATGCTGTTTTTGCAAGAGAAAATTTTCTACTTCACAAGCGCTAGGAGGACATCAGAATGCCCATAAGGCTGAACGTGCCTTAGAAAAACAACGTAAACAAAGGTATGAAAGTGGTTTTTTGGGTTTAGGGCAACCTCACTTTAACCCTTATTTTAGTTATCCAAGTACTCTTTTTACACCCCCTTATTACAGGGGACTTGGGGCTAGAATGGAATCCATGATTCAAAAACCATCTTATATTAATCATAGAATCACTCCACATAGTTTTGGCACTTTTGGGTATGGTAATGGTGCTTTGTGTTTGCAAGAGATATTAAACCCTTCACTTGTTAATTTGAGAAATATGGAGGGTAGTAATAGTAATACTGGGGTTGGAATTCTAGGTATTGGGGGTACAACTACTTTAGGGATTGAAGATGGTACAAATAATAAAATTGGTGCTATCCTAAAATTTGGAGATTCTTCAACAAGTATTGCTACAACTTCAAACTCAAACACAAAAAAGAATATTATTGTGGCTCCTACTTCTACTAAGGATGATATTCATGATCAATCAAAGTCCAACGTTGAAGAAGAACCCTCTGATTCTAAATCGTCCTGGCTTGATTTATCACTCAAGCTTTAA 930 0.3645 MASQSSSTSATSQGQGDSSNSKKVVIMKEIEHDQPSNSNSNNKSIDFVKLSKDDAVLKLEVQEHNFFGPIQGGSSSCFSNNNNEEKYENNNEEKNSDSRSFSCCFCKRKFSTSQALGGHQNAHKAERALEKQRKQRYESGFLGLGQPHFNPYFSYPSTLFTPPYYRGLGARMESMIQKPSYINHRITPHSFGTFGYGNGALCLQEILNPSLVNLRNMEGSNSNTGVGILGIGGTTTLGIEDGTNNKIGAILKFGDSSTSIATTSNSNTKKNIIVAPTSTKDDIHDQSKSNVEEEPSDSKSSWLDLSLKL* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5286 309 ProSitePatterns Zinc finger C2H2 type domain signature. 103 123 IPR013087 -
Mal2g5286 309 Gene3D Classic Zinc Finger 78 141 - -
Mal2g5286 309 SUPERFAMILY beta-beta-alpha zinc fingers 98 129 IPR036236 -
Mal2g5286 309 ProSiteProfiles Zinc finger C2H2 type domain profile. 101 128 IPR013087 -
Mal2g5286 309 MobiDBLite consensus disorder prediction 1 22 - -
Mal2g5286 309 MobiDBLite consensus disorder prediction 1 44 - -
Mal2g5286 309 PANTHER ZINC FINGER PROTEIN JAGGED 73 309 IPR045320 GO:0003700
Mal2g5286 309 MobiDBLite consensus disorder prediction 281 299 - -
Mal2g5286 309 MobiDBLite consensus disorder prediction 275 309 - -
Mal2g5286 309 PANTHER ZINC FINGER PROTEIN KNUCKLES 73 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5286 Mal-Chr2 126135079 126136008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5286 96 156 C2H2 Transcription Factor Family AT5G01860 50.820 8.24e-14 67.8