Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5285 ATGATTTTGCTCTGTTTGTGTTGTTTATGTTTTTTTACTAAGAAGTTTAATACCCTGTTATTTGATTACAATTGGATGTATTTGCATAGAGCTGAGGTTGCATTATCACTTCTTAGAGAGAACAAAAATGGATTTGACATTGTTTTAAGCGACCTGCATATGCCTGACATGGATGGATTCAAACTTTTAGAGCATATTGGATTGGAGATGGATCTTCCTGTTATTATGATGTCGGCTGATGATGGGAAAAATGTGGTAATGAAAGGTGTGACACACGGTGCTTGTGATTATCTAATCAATCCGGTGTCCAATGATGCTAATTACTCATCTTCTGCGAACGAAGGCAAGAGCTTAAAGAAGAGGAAGGATGAAGAAGATGAAGCAGATGAGAGGGATGATTGTTCGACATCAAAGAAGCCACGAGTTGTTTGGTCTATTGAGCTTCATCAACAGTTTATGGCTGTTGTGAATCAATTGGGATTAGACAAGGTTGTTCCTAAAAAGATTATGGAAATGATGAATGTTCCCGGGCTCACTAGAGAAAACGTTGCAAGCCATCTTCAGAAATACCGTTTGTGTCCACAAGATTCAATATTTGGGGCAACCTCAATAAATGAAATTGATCTTCAAACCTTTTCAGCTTCTGGCCAGCTCTCGGCGCAAAGTCTAGCCAAGCTTCAAGCAGCAGGACTTATCAGTTCTGGAAACTCAAAACTAAGATTTGGAGAAGGGCAACTGCAACATATGAGCAGCAGTAAACCGATGAACTTTCTTCATGGAATCCCTACCAACATGGAGCCGAAGCAGTTTGCCAATTTTCACCAGTCTGCCCAATCCTTTGGCAGCACAAATACGCGAGTCAATGCTTCTGCTGCAAAAAGAAACCCCTGGTTGATGCAGATGGCTCAGTCTCAACCAAGAGGACCAAATGGAATATCAGTCAATAGTTTCCCTCTTAGATGCACTCCGGTTATATTCAGTAGCAGTACAAAAGGTGCGTTTCAACCGGAAGCTACTTCGGGAATTAAAGGATTAGGTGGATTTAGTTATGATGTTTATAATGAACTGCATCAGAAGTCCAATAATTGGGGCTTAGCTAATACAGGCCTGACATATGAGGCTTCTCAACATGCAAATCCTTTACAAGGCAACATTGATGTCTCGCCGTCGATTTTAGGCCATCGTGGTTTTTCCTCTATCCAATAG 1206 0.4088 MILLCLCCLCFFTKKFNTLLFDYNWMYLHRAEVALSLLRENKNGFDIVLSDLHMPDMDGFKLLEHIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLINPVSNDANYSSSANEGKSLKKRKDEEDEADERDDCSTSKKPRVVWSIELHQQFMAVVNQLGLDKVVPKKIMEMMNVPGLTRENVASHLQKYRLCPQDSIFGATSINEIDLQTFSASGQLSAQSLAKLQAAGLISSGNSKLRFGEGQLQHMSSSKPMNFLHGIPTNMEPKQFANFHQSAQSFGSTNTRVNASAAKRNPWLMQMAQSQPRGPNGISVNSFPLRCTPVIFSSSTKGAFQPEATSGIKGLGGFSYDVYNELHQKSNNWGLANTGLTYEASQHANPLQGNIDVSPSILGHRGFSSIQ* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5285 401 MobiDBLite consensus disorder prediction 108 136 - -
Mal2g5285 401 Gene3D - 13 133 - -
Mal2g5285 401 Gene3D - 135 195 - -
Mal2g5285 401 SUPERFAMILY CheY-like 22 105 IPR011006 -
Mal2g5285 401 PANTHER TWO-COMPONENT RESPONSE REGULATOR 314 400 - -
Mal2g5285 401 PANTHER TWO-COMPONENT RESPONSE REGULATOR 104 192 - -
Mal2g5285 401 PANTHER TWO-COMPONENT RESPONSE REGULATOR 215 307 - -
Mal2g5285 401 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 104 - -
Mal2g5285 401 PANTHER TWO-COMPONENT RESPONSE REGULATOR 104 192 IPR045279 GO:0009736
Mal2g5285 401 PANTHER TWO-COMPONENT RESPONSE REGULATOR 215 307 IPR045279 GO:0009736
Mal2g5285 401 MobiDBLite consensus disorder prediction 115 136 - -
Mal2g5285 401 ProSiteProfiles Response regulatory domain profile. 1 115 IPR001789 GO:0000160
Mal2g5285 401 Pfam Myb-like DNA-binding domain 141 191 IPR001005 -
Mal2g5285 401 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 104 IPR045279 GO:0009736
Mal2g5285 401 PANTHER TWO-COMPONENT RESPONSE REGULATOR 314 400 IPR045279 GO:0009736
Mal2g5285 401 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 139 192 IPR006447 GO:0003677
Mal2g5285 401 SUPERFAMILY Homeodomain-like 136 193 IPR009057 -
Mal2g5285 401 SMART REC_2 2 112 IPR001789 GO:0000160
Mal2g5285 401 CDD REC_typeB_ARR-like 30 105 - -
Mal2g5285 401 Pfam Response regulator receiver domain 30 104 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5285 Mal-Chr2 126122951 126126043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5285 33 380 Response Regulator Gene Family AT3G16857 41.357 2.89e-88 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mal2g5285 Response_reg 2.5e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5285 - K14491 mtr:MTR_2g034960 602.438