Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5283 ATGAAAATTTTATCAAAGAGGGTTCCCAAAAGATGGGAGGAGGAGGTCATGTCCACAACTTCTGATGCTGAAGAAAAGGAAGAGGAGTTTGACAAAGAACAATTGCTTGCGTGGAAGATGCCTATTACAGAGGCTTTTGCTGCTGTTGAAAATGTACCAGTAATGCATTTTCCCAGCAAGATTTCAAAGCATATCATTCCTAAAGATCAAAATAGAATGTTGTTAGTAGATGTTGACACAAAGAAGAAATACAAGTGTCGTTTAATTACTTCCATCAGATATCGTTATGAAAAATATTTGGGAGGAGAATGGTACCAATTTGTCAAAGATTGTAAGCTTGGAGAAGGTGATACTCTCGTCTTTGAGTTTGAGAAAGTTTCTCTAAAGTTATGTGTTATGGTTGTCCGTCCTAATCATCAACGTTGA 426 0.3685 MKILSKRVPKRWEEEVMSTTSDAEEKEEEFDKEQLLAWKMPITEAFAAVENVPVMHFPSKISKHIIPKDQNRMLLVDVDTKKKYKCRLITSIRYRYEKYLGGEWYQFVKDCKLGEGDTLVFEFEKVSLKLCVMVVRPNHQR* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5283 141 ProSiteProfiles B3 DNA-binding domain profile. 40 138 IPR003340 GO:0003677
Mal2g5283 141 SMART B3_2 46 138 IPR003340 GO:0003677
Mal2g5283 141 SUPERFAMILY DNA-binding pseudobarrel domain 50 138 IPR015300 -
Mal2g5283 141 MobiDBLite consensus disorder prediction 1 26 - -
Mal2g5283 141 Pfam B3 DNA binding domain 56 136 IPR003340 GO:0003677
Mal2g5283 141 CDD B3_DNA 55 136 IPR003340 GO:0003677
Mal2g5283 141 Gene3D - 16 139 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5283 Mal-Chr2 126121153 126121704 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal2g5283 B3 4.8e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5283 - K17108 mtr:MTR_3g117130 80.1073