Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5282 ATGAAGAAGAAGCTTGATACCCGTTTCCCTGCTGCTCGGATAAAGAAGATTATGCAAGCAGACGAGGATGTTGGAAAGATAGCACTGGCAGTTCCTGTTTTAGTTTCAAAAGCTCTGGAATTATTTTTGCAAGATCTTTGTGACCGTACTTATGAAATAACTCTACAGAGAGGAGCAAAGACCATGAATGCATTGCATTTGAAACATTGTGTGCAAAGCTACAATGTCTTTGATTTTTTGAGAGACATTGTCGGCAGGGTTCCTGACTATAGCCACGGCCATGGCCATTCTGAGGCTGGGGCTGATGATCGCACCGTTCCAAAGAGAAGGAAAGCTGCTGGCGATGATTGCAATGACAGCGATGAAGAGGCTAAGCGCAGTAAAATGCTTGAGTTGGGCCACACTGGCGGTACTGGTAGGGGAAGAGGAAGAGGTAGGGGAAGAGGCCGTGGTCGAGGGGCTCGAACCGCAGAAAGAGAAAGCTTACATCAGCAGGTTGAATCTGAATCTTGCACCTCTATTCAACAAAGTAACAAAGAAATCCCTAATACAAGTGTGGCAGTAGATAATGGTTCAGACCCAAAGCAGTTATCAAAGGAAAATATTGCAGCTCATGAAGAAAGTACTCGATCTCTCCGAAACATTGATCTGAATGCCAACTTACATGAAAACGAGGACAAAAACAATACAAGCATGGCTACGCCTACTCATGCCTCATTGTCTGAACCTGCTGCAACAACAGATATGCAACATGAAGAAATTCCAGGTTGGTCCCTTTCTGATGTCGACAAGATGGCGATTGACACATTGCAGCTTGCAGCAAACCTTGGTAATAGGCTAGATGAGGATGAGGAAGATTATGATGAGGAGGAAGGGTAA 879 0.4471 MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVGRVPDYSHGHGHSEAGADDRTVPKRRKAAGDDCNDSDEEAKRSKMLELGHTGGTGRGRGRGRGRGRGRGARTAERESLHQQVESESCTSIQQSNKEIPNTSVAVDNGSDPKQLSKENIAAHEESTRSLRNIDLNANLHENEDKNNTSMATPTHASLSEPAATTDMQHEEIPGWSLSDVDKMAIDTLQLAANLGNRLDEDEEDYDEEEG* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5282 292 PANTHER HISTONE SUPERFAMILY PROTEIN 1 290 - -
Mal2g5282 292 MobiDBLite consensus disorder prediction 92 130 - -
Mal2g5282 292 SUPERFAMILY Histone-fold 3 99 IPR009072 GO:0046982
Mal2g5282 292 MobiDBLite consensus disorder prediction 151 165 - -
Mal2g5282 292 MobiDBLite consensus disorder prediction 225 246 - -
Mal2g5282 292 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Mal2g5282 292 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 290 - -
Mal2g5282 292 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Mal2g5282 292 MobiDBLite consensus disorder prediction 166 196 - -
Mal2g5282 292 MobiDBLite consensus disorder prediction 225 249 - -
Mal2g5282 292 MobiDBLite consensus disorder prediction 92 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5282 Mal-Chr2 126105009 126110542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5282 1 280 CCAAT-HAP5 Transcription Factor Family AT3G12480 50.508 2.48e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mal2g5282 CBFD_NFYB_HMF 1.4e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5282 K21752 - gmx:100810093 399.823