Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5216 ATGAGTAGCGTTTCAGGAAACATGAATGGGTCAACAATTCCAATAGTTGAAGGTGTAGAGAAATTGGAGAACAATATTGATGTAAATATTGTGCAACATGGGGAAGAGAGTGTTGTTGATTATACACCACACTTGGAAATGGAATTCGAATCTGAGGCAGCGGCATATGAATTTTATAATAAGTATAGTAGGAGAATTGGGTTTGGTATTCGGCGAGAATATGGAAATAAAAGTAAGAAAGATGGAATTCTGACTTCAAGAAGATTCACATGCTTTAAAGAGGGTAAACGGGGTGTTGACAAACGAGACCATTTGATAAAAGAGGGGAGAGCAGAAACCAGAACGGGATGTGATGCGCGTATGGTTATTTCACTTGATCGAAAGATTGGAAAGTACAAGGTTGTTGACTTTGTAGCTCAACACAATCATTTTCTTGAACCGCCAGGGTATTTTCATACGCCTCGCTCCCATCGACAGATATTTGAGTTGCGAGCATCTCAAGTTGTAGTGGCTGACAGATCTGGATTAAAACGAAACGATTTTCATGAATATGTGTCCAAGCAAGATGGTGGAATAGATGCTATTGGTTATCTTCAAACTAAAAGAATGCGGTCACTAATGTATGGTGAAGTGGGTGTGTTGTTGATGCATTTCAAACGGCAAAGTGAAAATCCTTCATTCTTTTATGACTTCCAAATGGATGTTGAAGAGCAAATAACAAATATATTTTGGGCGGATGCACAAATGATAAATGATTATGGATACTTCGGTGATGTCATCACTTTTGACACAACGTACATGACAAATAAGGATCGTCGACCATTGGGAGTATTTGTTGGACTAAATAATCACAAGCAAATGGTTGTTTTTGGTGCAACATTGCTATATGATGAAACAATCCCTTCTTTTCAATGGTTATTTGAAACTTTTCTCAAAGCAATGGGTGGAGAAAAGCCTAAAACCATTCTAACTGATCATGATGCAGCAATGGGTAAGGCTATTTCTTTAGTTATGCCGGAAACATTTCATGGATTGTGCACATGGCGTATAAGAGAAAATGCACAGAGACATGTGAACCATCTATATCAAAAGAGTTCACAATTCTGCTCAGATTTCGAAGCATGCATTGATCTACATGAAGAGGAAGGTGATTTTTTGAATGCATGGAATACTTTACTTGTTAAACATAATGTTTCTGAAGATTCTTGGCTCCATATGATTTTTCAATTGAAGGAAAAATGGGCATGGGCGTACGTTCGAAATCATTTCACTGCAGGTATGAGATCTACTCAATCAATTGAGAGTTTTAATGCTGAGTTGAATAATTATTTGAAGTCAGATTTGAATTTAGTACAATTTTTCACACACTTTGAAAGGGTTGTCAATGGAATACGGAACAATGAGTCAGACGCCGATTATGAGTCAAGACATGAGTCACCTAATTTGAAAATGAAAAGGGCTCCTATGCTTGTACAAGCTGGAAACATTTACACTCCAAAAACCTTTGAGGAATTTCAAGAAGAATATGAGGAATATCTAGGCACTTGCGTAAAGAATCTGAAAGAAGGGTTGTATGTTGTTACAAATTATGATGATAATAATAAGGAGCGGATGGTAATGGGGAATCTTATGGATGAAAAGGTTGCTTGTGATTGTCGTAAATTTGAGACACATGGCATCTTATGCAGTCATGCTTTGAAAGTATTAGATGTTATGAATATTAAGCTGATTCCTCAACACTATATACTGAAGCGTTGGACAAGAGATGCAAGATTGGGAAGTAATCAAGATTTGAAAGGGCAACATATTGAACTGGATATAAAAGCTCATTTCATGAAGCGATACAATGAGTTATGTCCTCAAATGGTTAAATTGACCAACAAAGCATCAAAATCTCATGAAACTTACACATTTTTGTCCAAAATTTATGAAGAGTCTGATAAAATAATTGATGATATGTTGGCTAAAAAGTTTGTGGGTGTAGAATCACTTGAGATGTGTCATATATCCATACCAATTGCCAAGGAAAAAATTGACAACAATGTCAACACTCTGGATGTTGGTGAGGAGCAGGGTATAAAGAAAGCGAGATTGCTCAATTAA 2103 0.3657 MSSVSGNMNGSTIPIVEGVEKLENNIDVNIVQHGEESVVDYTPHLEMEFESEAAAYEFYNKYSRRIGFGIRREYGNKSKKDGILTSRRFTCFKEGKRGVDKRDHLIKEGRAETRTGCDARMVISLDRKIGKYKVVDFVAQHNHFLEPPGYFHTPRSHRQIFELRASQVVVADRSGLKRNDFHEYVSKQDGGIDAIGYLQTKRMRSLMYGEVGVLLMHFKRQSENPSFFYDFQMDVEEQITNIFWADAQMINDYGYFGDVITFDTTYMTNKDRRPLGVFVGLNNHKQMVVFGATLLYDETIPSFQWLFETFLKAMGGEKPKTILTDHDAAMGKAISLVMPETFHGLCTWRIRENAQRHVNHLYQKSSQFCSDFEACIDLHEEEGDFLNAWNTLLVKHNVSEDSWLHMIFQLKEKWAWAYVRNHFTAGMRSTQSIESFNAELNNYLKSDLNLVQFFTHFERVVNGIRNNESDADYESRHESPNLKMKRAPMLVQAGNIYTPKTFEEFQEEYEEYLGTCVKNLKEGLYVVTNYDDNNKERMVMGNLMDEKVACDCRKFETHGILCSHALKVLDVMNIKLIPQHYILKRWTRDARLGSNQDLKGQHIELDIKAHFMKRYNELCPQMVKLTNKASKSHETYTFLSKIYEESDKIIDDMLAKKFVGVESLEMCHISIPIAKEKIDNNVNTLDVGEEQGIKKARLLN* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5216 700 Pfam MULE transposase domain 259 353 IPR018289 -
Mal2g5216 700 SMART 26again6 548 575 IPR006564 GO:0008270
Mal2g5216 700 ProSiteProfiles Zinc finger SWIM-type profile. 525 573 IPR007527 GO:0008270
Mal2g5216 700 PANTHER OS03G0181600 PROTEIN 21 646 - -
Mal2g5216 700 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 21 646 IPR031052 GO:0006355
Mal2g5216 700 Pfam SWIM zinc finger 546 570 IPR007527 GO:0008270
Mal2g5216 700 Pfam FAR1 DNA-binding domain 57 146 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5216 Mal-Chr2 123745564 123748262 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal2g5216 MULE 9.2e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5216 - - cam:101500125 1085.86