Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5210 ATGAAAGAATCTATGCAAAGTGATGAAATCCCAAAATTCAGAGATATTAGACGCTATTACTGCCAATTCTGCGGTATTTGTAGATCAAAAAAATCCCTAATTACCTCCCACATCAATTCAGAACATAAGGAGGAGGTGGAGAGAGCAAGAGTTGAATGTGCACCTGAATCAGAGGGTGTTTTGAAAGCTAATACTTGTGAGGAATGTGGTGCTAGTTTCAAAAAACATGCATATTTGTTGCAGCATATGCAAAGTCATTCTCTTGAGAGGCCATATGTATGTAGCCTTGAAGATTGTAATGCAAGTTACAGAAGAAAGGATCATTTGAATCGGCATCTTCTACAGCATCAAGGGAAAATTTTTAAATGTCCTATTGAGAATTGCAAAAGTGACTTCTCGCTGCAGAGCAATTTGAAAAGACACATTGATGAGATGCACGATGAAAATTCTACCCCTCCTCGTAGCGGTGAAAATCAGAAGCAGTTTGTATGTCCTGAAATTGGCTGCGGAAAGGTTTTCAGATATGCATCACAACTTCAGAAGCATGAAGATTCTCATGTTAAGCTTGAATCAATTGAAGTGGTGTGCTTAGAACCTGGTTGCATGAAATATTTCACTAATGCCGAGTGCATTAAAGCTCATGTTAAATCGTGCCATCAATATGTGACCTGTGACGCTTGTGGGGCTAAGCAACTGAAGAAGAACATGAAGAGGCATCTCCGCACACACGAAGCCAGCAGTTCATCGGAAGCATTTAAATGTGAATTTGAGGGCTGTGACTGCACATTCTCAACTAAATCTAATCTTCATAAGCATGAGAAGGCTGTACACTTGCAAGTAAAGCCTTTTATGTGTGGGTTTCCTAATTGTGGAATGAGGTTTGCTTACAAACACGTGAGAGATAATCACGAAAAGACTGCAAAACATGTTTTTACCCTTGGTGATTTTGAAGAAGCTGATGAAGAATTCAGGTCAAGGCCAAGAGGAGGGGTGAAGAGAAAATGTCCTCCTACAGTAGAAATGTTGGTTAGGAAGAGAGTTACCCCACCTAGTCAATTGGAGAACTTGTTATTTATGCAGGATTGTCAGGAAGATGGATCATACTCCCTCTCTCTAGGCTAA 1122 0.4011 MKESMQSDEIPKFRDIRRYYCQFCGICRSKKSLITSHINSEHKEEVERARVECAPESEGVLKANTCEECGASFKKHAYLLQHMQSHSLERPYVCSLEDCNASYRRKDHLNRHLLQHQGKIFKCPIENCKSDFSLQSNLKRHIDEMHDENSTPPRSGENQKQFVCPEIGCGKVFRYASQLQKHEDSHVKLESIEVVCLEPGCMKYFTNAECIKAHVKSCHQYVTCDACGAKQLKKNMKRHLRTHEASSSSEAFKCEFEGCDCTFSTKSNLHKHEKAVHLQVKPFMCGFPNCGMRFAYKHVRDNHEKTAKHVFTLGDFEEADEEFRSRPRGGVKRKCPPTVEMLVRKRVTPPSQLENLLFMQDCQEDGSYSLSLG* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5210 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 121 151 IPR013087 -
Mal2g5210 373 SUPERFAMILY beta-beta-alpha zinc fingers 158 188 IPR036236 -
Mal2g5210 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 64 91 IPR013087 -
Mal2g5210 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 162 191 IPR013087 -
Mal2g5210 373 PANTHER ZINC FINGER PROTEIN 11 353 - -
Mal2g5210 373 PANTHER - 11 353 - -
Mal2g5210 373 Gene3D Classic Zinc Finger 5 91 - -
Mal2g5210 373 ProSitePatterns Zinc finger C2H2 type domain signature. 123 146 IPR013087 -
Mal2g5210 373 Gene3D Classic Zinc Finger 245 323 - -
Mal2g5210 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Mal2g5210 373 ProSitePatterns Zinc finger C2H2 type domain signature. 94 116 IPR013087 -
Mal2g5210 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 252 282 IPR013087 -
Mal2g5210 373 ProSitePatterns Zinc finger C2H2 type domain signature. 196 219 IPR013087 -
Mal2g5210 373 ProSitePatterns Zinc finger C2H2 type domain signature. 164 186 IPR013087 -
Mal2g5210 373 Gene3D Classic Zinc Finger 152 222 - -
Mal2g5210 373 SUPERFAMILY beta-beta-alpha zinc fingers 63 116 IPR036236 -
Mal2g5210 373 SUPERFAMILY beta-beta-alpha zinc fingers 233 291 IPR036236 -
Mal2g5210 373 ProSitePatterns Zinc finger C2H2 type domain signature. 285 309 IPR013087 -
Mal2g5210 373 SMART c2h2final6 121 146 IPR013087 -
Mal2g5210 373 SMART c2h2final6 64 86 IPR013087 -
Mal2g5210 373 SMART c2h2final6 252 277 IPR013087 -
Mal2g5210 373 SMART c2h2final6 222 243 IPR013087 -
Mal2g5210 373 SMART c2h2final6 92 116 IPR013087 -
Mal2g5210 373 SMART c2h2final6 162 186 IPR013087 -
Mal2g5210 373 SMART c2h2final6 283 309 IPR013087 -
Mal2g5210 373 SMART c2h2final6 194 219 IPR013087 -
Mal2g5210 373 SMART c2h2final6 19 42 IPR013087 -
Mal2g5210 373 SUPERFAMILY beta-beta-alpha zinc fingers 102 146 IPR036236 -
Mal2g5210 373 Gene3D Classic Zinc Finger 118 151 - -
Mal2g5210 373 ProSitePatterns Zinc finger C2H2 type domain signature. 66 86 IPR013087 -
Mal2g5210 373 Gene3D Classic Zinc Finger 92 117 - -
Mal2g5210 373 ProSitePatterns Zinc finger C2H2 type domain signature. 254 277 IPR013087 -
Mal2g5210 373 Pfam Zinc finger, C2H2 type 252 277 IPR013087 -
Mal2g5210 373 Pfam Zinc finger, C2H2 type 162 186 IPR013087 -
Mal2g5210 373 Pfam Zinc finger, C2H2 type 65 86 IPR013087 -
Mal2g5210 373 Pfam Zinc finger, C2H2 type 92 116 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5210 88 312 C2H2 Transcription Factor Family AT1G72050 51.812 6.73e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal2g5210 zf-C2H2 0.0052 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5210 K09191 - gmx:100801812 599.356