Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5193 ATGAGTATGTTAGGCCTTAGAGACCTAGTTCTCATAGCTCCATCACCTTCCCTTCAACATCATCATCATCAACAACAACAAAATCAAAACCAACCTATTTCACATGATCACAATTCCAACCACCCTTTACCTTCATCAGCTTCCTTAAGTGTTGGTTTTGGCATTTTTCCACTCCTCACTGCCACACCTTGCATGCCACAACAACAACAACAACAACCTCAAAACAATGAAGTTCAAGAAAATCCTAACAACAACAATTTTTGGAACCTTAGGATGTGTCCTGAAGTAGTGAATCTTCCTAAAAAAGGAGTGATCAATGTTGATGATGAGAATCACAACAACAATAGCAAGATGGTTTTGATGGAAAATGAAGAAAATGGTGTGTATGGTTCTGAGTATAGAGTGTGTCAAGATTGTGGTAATAGAGCTAAGAAAGATTGTGTTTTTAGAAGATGTAGGACTTGTTGTAAGGGACGTGGTTATGATTGTAGCACTCATTTGAAGAGTACTTGGATTCCTTCGACTCGTCGTCGAGAGAGGGAGGTGGAGATGTTTGCTGCTGGTGGTGGTGATGGTGAGGGCTGTTCTGGTGTTAAGAGACCAAAAACTTTATTAGGGTCATCACAGAATGCTACTGCTACTTCTCATAGTTCAAATTCTAATGGTACTACACCAAAGAGTTTTGCTACTAGCTCTTGTCATCAAGATGCAGGTTTCAAAGAGGGTTTACCAGGTCATGTTCATGCACCTGCTGTGTTTAGGTGCCATAGAGTAACTGCAATTGGCAATGGTGAAGATGAATTTGCTTACTTGGCTACTGTTCATATTAGTGGCCATGTGTTTAAAGGGTTTCTCTATGATCATGGTGTTGATGGGAAAAATCCAATGCCTTGTCTTTCAGAGCTTCAATTGGGAAATAATTGTAGTGGAAAGAATGGTGAATGTTCTTCTGCAATTGGTGTTCCAAACAATAATGCTTACCCTGCTTCTGGTAGCTAG 999 0.4004 MSMLGLRDLVLIAPSPSLQHHHHQQQQNQNQPISHDHNSNHPLPSSASLSVGFGIFPLLTATPCMPQQQQQQPQNNEVQENPNNNNFWNLRMCPEVVNLPKKGVINVDDENHNNNSKMVLMENEENGVYGSEYRVCQDCGNRAKKDCVFRRCRTCCKGRGYDCSTHLKSTWIPSTRRREREVEMFAAGGGDGEGCSGVKRPKTLLGSSQNATATSHSSNSNGTTPKSFATSSCHQDAGFKEGLPGHVHAPAVFRCHRVTAIGNGEDEFAYLATVHISGHVFKGFLYDHGVDGKNPMPCLSELQLGNNCSGKNGECSSAIGVPNNNAYPASGS* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5193 332 MobiDBLite consensus disorder prediction 206 229 - -
Mal2g5193 332 MobiDBLite consensus disorder prediction 17 46 - -
Mal2g5193 332 Pfam Domain of unknown function (DUF702) 134 291 - -
Mal2g5193 332 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 330 IPR007818 GO:0003700|GO:0006355
Mal2g5193 332 MobiDBLite consensus disorder prediction 65 84 - -
Mal2g5193 332 MobiDBLite consensus disorder prediction 18 46 - -
Mal2g5193 332 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 135 177 IPR006510 -
Mal2g5193 332 PANTHER LRP1 CARBOXY-TERMINAL DOMAIN PROTEIN 2 330 - -
Mal2g5193 332 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 243 290 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5193 Mal-Chr2 123305532 123307307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5193 1 327 C2H2 Transcription Factor Family AT5G12330 43.750 4.24e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mal2g5193 DUF702 2.2e-52 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5193 - - gmx:100806835 447.203