LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g5107	ATGGAGCAACAACTTATGATGTTTCCTTCTACCAAGGGAGTTTGTACTTATGATGTTTTCCTCAGTTTTAGAGGAGAAGATACTCGCTATGGTTTCACCGGACATCTCTACCAGGCATTACACCAAAGAGGAATCAACACTTTCATGGATGATGAAGTTATAAAGAGAGGAGAACAAATTTCACCTACTATTTTCAAAGCAATTGAAGAGTCAAAGATGGCTATAATTGTGTTCTCCAAAACATATGCATCCTCAAAATGGTGCCTTCATGAACTTGTCAAAATCATTGGATGTTTTAAAGACAAGGAACTAGTGGTGTTTCCAGTGTTTTACAACGTTGATCCATCTGAGGTTCGAAATCAGACGGGGGGTTATGGACATGAATTGGCTAAGCATGAGGAGAAAATGAAGAATAACACAAAGGATGTGCAAAGTTGGAGGTTGGCTTTACGTGAAGCTGCCAATCTGGCAGGATGGTGTTTTAGAGATGGATACGAATATGAATATGCATTTATCAAAACGATCGCTGATACGGTGTGCAGTACATCAAAAAAGAAGCTTTCCCATGTTGATGATTATGCAGTTGGACTTGAGTCACGCGTATCTAAAATACTATACCGTTTGCAAATGCCTGATCATAATGTCATCATGATAGGAATATGTGGGGTTGGTGGAATAGGCAAAACTACTTTGGCAAGAGCCGTGTATGATACCATTGGTCAACAATTTGAAGGTCTATGCTTTCTCTGTGATGTAAGAGAAAATTCAACCAAATATGGGTTGGCATATCTACAACAGGTAATTCTTTCTGATACGGCTGGCGAGAATATTAAGCTGCGTAACGAGAATGAAGGAATTGCCATCTTAATCAGGAAGTTGCAAAGTAAAAGGATTCTTTTGATACTTGATGATGTTGACAAGTTGGATCAATTGAAGAATTTAGCAGGAGCGCCAAGTTGGTTTGGTCGGGGAAGTAGGATTATCATAACTACTAGGCGTAAAGATATTCTAGCTGCTTATGGAGTAGGAAATATATATGATGTACCTGTATTTGAGTATTATGAAGCTCTTCACCTTTTAAGTTCCATTACATCAAAAAGACCTAATCCCGATGGAGTCTGGGATCGTGCAATCAGCTATGCCCGTGGTCTTCCGTTGGTTTTAAAGGTTATAGGATCTGATTTATTAGAAAAATCAACAGATGAATGGGAGATTTCATTAGACAGATATGAAAAGGTCTGCAATGAAGAAACTCAGAGTATACTTGAAGTGAGTTACAATAGTTTGAATGAATGCGAGAAGAGAATTTTCATTGACATCGCGTGTTTCTTCAAGGGTGAGCCATTTTCATATGTCAAAGAAATACTATCTGCTTGTGGTTTCTATACAAAATATGGTATTGACAGACTTAAGGATAGATCCCTCATATCAATCACTTCCAGTGGAAGCTTGATGGTGCATGATCATATAATAGACATGGCTATGAATATTGTACAGCAAGAATCACCCATGAATCCTTGCAAACGAAGTAGGTTATGGTTACCTGGAGATGTTCTTCAAGTTTTAGACGAAAATGCGGGAAATGATAAAATCGAGGTCATGATATTGGACAGCTTACCACAAGAAAATGTAGAGAAATTGAGTGACAAAGCCTTCAAAGAGATGAAAAGCTTGAGAATACTGATTATTAAGGACGCGATATATTCCGAAGTCCTCCAACATCTCCCTAATAGCTTAAGAGTTTTGGATTGGAGTGGATATCCTTCATGTTGTTTACCTCCTGATTTTGTCAAATTGCCTTTTAATTGTCTCATTTTCAACAAGTTCAAGAATATGAAGTATTTGATCAGTATTGATTTCACTGACTGTATATTTTTAAGAGAAGTACCTGATATGTCTGGTATCCCATACTTGAGGACATTGTATCTTGATAATTGCATAAATGTTACTAAAATTCACGATTCTGTTGGATTTCTTGATAACCTTGAAGAGCTGACAGCCACAGGATGCACTAATCTAGAAACAATCCCTGTTGCATTCAAGCTGGCATATCTTAGAGTTCTCTCTTTCTCTGAGTGCTTGAAACTCACGAGTTTTCCTGAGATACTGTGCAAGATCGAAAATTTACGACACATCAACTTGTGGCAAACTGCCATAGAGGAATTACCATTTTCAATTGGAAATGTGACAGAACTTGAAGTTTTAACTCTGATGGAATGTACTAGGCTTGATAAGCTACCTAGTAGCATATTTACACTACCAAGACTTCAAGAAATTCAAGCTGACTCGTGTAAAGGTTTCGGCATCTCTACTGAATTTGAAGAAGATAATGGACCACTGAATTTCACTGTTTCTCCAAACAAGATTCATCTGTATTTGAGCACTTGCAATTTAACAGATGAACATCTTTTTATATGTCTAAGTGGTTTTGCGAACGTGGTACATTTGGACATATCTAACAACAATTTCACTGTCCTTCCACCATGCATTAAAGAATGTATCAACTTGAAGACTCTTCTACTCACAAACTGTATGCAGCTTCAAGAAATCTCAGTAATTCCACAAAATTTGAGAGAAATAGATGCATTGAACTGCACATCATTGACATCCCAGTCAAAAAGTGTACTATTAAGCCAGGCATATCATGAAACTGGAGAAAAAACTGTAATGCTTCCAGGATCAAGTATTCCAGAATGGTTTGATCATTGTAGCAGTGAAAGATCCATATCCTTTTACGCTCACGAAAGATTCCCTAGTTTTTGTATCTGTTTTGTTTTCGGAATGTTGGAATATCTGCCTCATCATTTTCTAGTTAGGTTTTGTTTAACCATCAACGGCCACAAAACGATACTATCATCGTGTTCTAGTTTGACAATTGTGAAAGAACATGTATGGCTGTTTGATCTAAGAGACATTATCAATAATCACAATCTCAGAGAAAAATGGTTGGAACATGGTTGGAATCATGTGGAAGTTTCATGTGTGGATTGTCAAGATGAGCATTTGATGGCACAAGCTGATAATGGAATTAGAAGAATGACAATTGTGAAATGGTATGGAATTCATGTGTATAGGCAAGAAAACAGAATGGAGGATATATCATATTCACAAGTGCCAAGATTCTACAAGAATGCTTATGATGAAAGATTTAATGAAGACAATTACCCTTTGTCTAAACGGTTGTGTAGATGA	3192	0.3709	MEQQLMMFPSTKGVCTYDVFLSFRGEDTRYGFTGHLYQALHQRGINTFMDDEVIKRGEQISPTIFKAIEESKMAIIVFSKTYASSKWCLHELVKIIGCFKDKELVVFPVFYNVDPSEVRNQTGGYGHELAKHEEKMKNNTKDVQSWRLALREAANLAGWCFRDGYEYEYAFIKTIADTVCSTSKKKLSHVDDYAVGLESRVSKILYRLQMPDHNVIMIGICGVGGIGKTTLARAVYDTIGQQFEGLCFLCDVRENSTKYGLAYLQQVILSDTAGENIKLRNENEGIAILIRKLQSKRILLILDDVDKLDQLKNLAGAPSWFGRGSRIIITTRRKDILAAYGVGNIYDVPVFEYYEALHLLSSITSKRPNPDGVWDRAISYARGLPLVLKVIGSDLLEKSTDEWEISLDRYEKVCNEETQSILEVSYNSLNECEKRIFIDIACFFKGEPFSYVKEILSACGFYTKYGIDRLKDRSLISITSSGSLMVHDHIIDMAMNIVQQESPMNPCKRSRLWLPGDVLQVLDENAGNDKIEVMILDSLPQENVEKLSDKAFKEMKSLRILIIKDAIYSEVLQHLPNSLRVLDWSGYPSCCLPPDFVKLPFNCLIFNKFKNMKYLISIDFTDCIFLREVPDMSGIPYLRTLYLDNCINVTKIHDSVGFLDNLEELTATGCTNLETIPVAFKLAYLRVLSFSECLKLTSFPEILCKIENLRHINLWQTAIEELPFSIGNVTELEVLTLMECTRLDKLPSSIFTLPRLQEIQADSCKGFGISTEFEEDNGPLNFTVSPNKIHLYLSTCNLTDEHLFICLSGFANVVHLDISNNNFTVLPPCIKECINLKTLLLTNCMQLQEISVIPQNLREIDALNCTSLTSQSKSVLLSQAYHETGEKTVMLPGSSIPEWFDHCSSERSISFYAHERFPSFCICFVFGMLEYLPHHFLVRFCLTINGHKTILSSCSSLTIVKEHVWLFDLRDIINNHNLREKWLEHGWNHVEVSCVDCQDEHLMAQADNGIRRMTIVKWYGIHVYRQENRMEDISYSQVPRFYKNAYDERFNEDNYPLSKRLCR*	1064

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g5107	1063	ProSiteProfiles	TIR domain profile.	15	179	IPR000157	GO:0007165
	Mal2g5107	1063	SMART	till_3	16	156	IPR000157	GO:0007165
	Mal2g5107	1063	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	11	1051	-	-
	Mal2g5107	1063	Gene3D	Ribonuclease Inhibitor	528	775	IPR032675	-
	Mal2g5107	1063	SUPERFAMILY	"Winged helix" DNA-binding domain	418	522	IPR036390	-
	Mal2g5107	1063	Pfam	NB-ARC domain	198	431	IPR002182	GO:0043531
	Mal2g5107	1063	Gene3D	-	181	341	IPR027417	-
	Mal2g5107	1063	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	189	440	IPR027417	-
	Mal2g5107	1063	SUPERFAMILY	Toll/Interleukin receptor TIR domain	15	159	IPR035897	-
	Mal2g5107	1063	Pfam	TIR domain	17	187	IPR000157	GO:0007165
	Mal2g5107	1063	Gene3D	-	351	436	IPR042197	-
	Mal2g5107	1063	Gene3D	-	11	180	IPR035897	-
	Mal2g5107	1063	SUPERFAMILY	L domain-like	541	876	-	-
	Mal2g5107	1063	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	11	1051	IPR044974	GO:0006952
	Mal2g5107	1063	Gene3D	Ribonuclease Inhibitor	776	884	IPR032675	-
	Mal2g5107	1063	PRINTS	Disease resistance protein signature	727	743	-	-
	Mal2g5107	1063	PRINTS	Disease resistance protein signature	381	395	-	-
	Mal2g5107	1063	PRINTS	Disease resistance protein signature	292	306	-	-
	Mal2g5107	1063	PRINTS	Disease resistance protein signature	217	232	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g5107	Mal-Chr2	120205359	120211113	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g5107	8	764	WRKY Transcription Factor Family	AT4G12020	27.945	1.38e-66	244

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g5107	-		-	gmx:100796191	1363.59