Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5100 ATGTTTTTATCTGAACAGGTTTTTATACACAATAAGGAAAACATGGAAAAGAGGGAATTTTCTGAATTGATATCAAAGATGAAAGTTTTGGCTGATGAGGTTGTTTCTTTTGCTAAGAAAACTGAAATTGAGGTAGATGCTTTCTCTGAGTTTTCCATGTTGGTTGAGAAATTGCCACCGATCTTGAATGAATTGAGTGATAACAGCACTATATTGGACAAGCCATCAATTCAAAAATCGTTGGAATCTCTTGAGAATGAGCTACGGCGTGCTAAAGCTTTAACGAAAAGCTCGAATTTAAGACACCCTATTAAGCAAATCGAGGACATGACACATGATATTGGCCGATCGTTAGGAGTTTTGCTTGTTGCCAGCCTTGAGGTGTCCATTGATTTTAGAGAAAAGATTGGTACATTGCAAAGACAGATGATGAATGCAAGATTTGACGGCAGTTCAAGTGTGACTTCAAGTCCGAAATCAGAATTTTTCGCAAATGAAACGAAGATGGTTGGGGAAATAGAAGAGGAAGTAGTTCATGTTTCTATCGATGATGTGGTTTTGCAACTTAAAAATGGTAATGATGAGGAATTTGCAGTTTCACTTCTGAGACTAAAGGAGTTCATGAGAAGTGAAAAATTGGATGGTGGTTTGATCAACGAGGATGCAACTATTGCCATTCTTTTCAAGCGTCTAGTTTCGTGTAAGGCAGACAATAGGCTATGCATACTTCAATTGCTAAGAAGTATTGCTTTTGGAAATGATGAGAAAAAGGAGAAGATGGTTGAGGTTGAGTTTTTATCAGCAGTGGTGAAGTCTCTTACAAGGGATTCAGAAGAGAGGAGGGAAGCAGTGGGACTGTTGCTAGACCTCTCTAACGTTCCAGCAGTTCGAAGGCGGATCGGAAGAATTCAAGGGTGTATCGTTATGTTGGTCGCCATCCTTAATGGTGATGACCCAGTTGCTTCACATGATGCAGCGAAGTTATTGGATATTTTGTCTAGTAATAATCAAAATGCACTTCATATGGCTGAGGCTGGATACTTTAGGCCACTAGTTCAGTATTTGAAGGAAGGGTCTGACATGAACAAGATCCTAATGGCAACATCACTTTCTAGGTTGGAACTCACTGATCACAGCAAACTTACCCTTGGAGAAGATGGAGCGATCGAGCCCCTTGTGAAAATGTTTATTACCGGGAAACTTGAATCCAAGTTATCATCTCTAAATGCACTACAAAATCTGTCTAGCTTGACCGAGAACGTGCAACGTTTGATTCGATCAGGAATTACAGGATCTTTGCTACAACTTCTTTTTTCTGTAACATCTGTGCTCATGACTCTAAGGGAGCCAGCATCAGCTATTCTTGCAAGAATTGCTCAGTCGGAATCCATTCTCGTCAACGAAGACGTTGCTCAACAGATGCTTTCGCTTTTGAATCTATCAAGTCCTATAATTCAAGGTCATCTGTTAGAAGCTCTAAATAGCATGTCTTCTCATCTTGGTGCATCCAAAGTGAGAAGAAAAATGAAGGAAAAAGGTGCACTACAACTACTCTTACCTTTTCTTAATGAAAACAACGCCAAAATCAGGTGTAAAGTCTTGAATTTGCTATACACACTTTCTAAAGATATAACCGATGAGTTGACCGAATATCTTGATGAAACTCATATTTTCGACATTGTTAATATTGTCTCATCATCCACATCAGAGAGTGAAAAGGCAGCTGCAGTTGGCATACTGAGTAATCTTCCCGCTAGCGATAAAAAAGTAACCGATATACTCAAGAGGGCAAATTTGCTACCGATTTTGATATCAATTTTGTGTTCTAGCAATGCTAGTAAATCGCCATCAACAAATAGCTTAATCGAGAATACTGCCGGTGTTATAAACCGCTTCACGAATTCATCTGACAAGAAACTACAACTTGTTTCGGTACAACACGGGGTGATTCCTTTACTCGTGAAATTGCTCTCGACAAGTTCACCAATCACAAAATCAAGGGCTGCAAACTCTCTGGCACAACTATCTCAAAATTCACTTTCTCTTAGGAAATCCAGAAAGTCAAGGTGGTTATGTGTTCAACCTTCAATGAGTGCATATTGTGAAGTTCATGATGGATATTGCTTTGTAAATAGCACATTTTGTTTAGTCAAAGCAGGTGCGGTTTCTCAACTTATCGAAATATTGGAAGATAAAGAGAAGGAAGTAGTTGAAGCTTCTCTTGTTGCACTTTCAACTCTTTTGCAAGATGAAATTTGGGAAAATGGTGTGAATTTCATTGCGAAATTATCAGGTGTGCAAGCTATTATAAAAAGTCTAGAAGTTGGTGATGCAAAGGTTGAAGAACATAGAGTGAAATATGGAGAATCTGCTCAAGTGGTTCTTATTGATTTGGCACAAAAAAGTGATTCTCGATTGAAGTCAACAGTTGCAAAAGTATTAGCAGAGTTAGAGCTGTTGCAAGCTCAATCAAGTTACTTTTGA 2484 0.3873 MFLSEQVFIHNKENMEKREFSELISKMKVLADEVVSFAKKTEIEVDAFSEFSMLVEKLPPILNELSDNSTILDKPSIQKSLESLENELRRAKALTKSSNLRHPIKQIEDMTHDIGRSLGVLLVASLEVSIDFREKIGTLQRQMMNARFDGSSSVTSSPKSEFFANETKMVGEIEEEVVHVSIDDVVLQLKNGNDEEFAVSLLRLKEFMRSEKLDGGLINEDATIAILFKRLVSCKADNRLCILQLLRSIAFGNDEKKEKMVEVEFLSAVVKSLTRDSEERREAVGLLLDLSNVPAVRRRIGRIQGCIVMLVAILNGDDPVASHDAAKLLDILSSNNQNALHMAEAGYFRPLVQYLKEGSDMNKILMATSLSRLELTDHSKLTLGEDGAIEPLVKMFITGKLESKLSSLNALQNLSSLTENVQRLIRSGITGSLLQLLFSVTSVLMTLREPASAILARIAQSESILVNEDVAQQMLSLLNLSSPIIQGHLLEALNSMSSHLGASKVRRKMKEKGALQLLLPFLNENNAKIRCKVLNLLYTLSKDITDELTEYLDETHIFDIVNIVSSSTSESEKAAAVGILSNLPASDKKVTDILKRANLLPILISILCSSNASKSPSTNSLIENTAGVINRFTNSSDKKLQLVSVQHGVIPLLVKLLSTSSPITKSRAANSLAQLSQNSLSLRKSRKSRWLCVQPSMSAYCEVHDGYCFVNSTFCLVKAGAVSQLIEILEDKEKEVVEASLVALSTLLQDEIWENGVNFIAKLSGVQAIIKSLEVGDAKVEEHRVKYGESAQVVLIDLAQKSDSRLKSTVAKVLAELELLQAQSSYF* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5100 827 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN-LIKE 14 827 - -
Mal2g5100 827 Gene3D - 698 822 IPR011989 -
Mal2g5100 827 Coils Coil 74 101 - -
Mal2g5100 827 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 14 827 - -
Mal2g5100 827 Gene3D - 332 689 IPR011989 -
Mal2g5100 827 SUPERFAMILY ARM repeat 370 780 IPR016024 -
Mal2g5100 827 Gene3D - 200 331 IPR011989 -
Mal2g5100 827 SUPERFAMILY ARM repeat 182 438 IPR016024 -
Mal2g5100 827 SMART arm_5 253 292 IPR000225 GO:0005515
Mal2g5100 827 SMART arm_5 502 542 IPR000225 GO:0005515
Mal2g5100 827 SMART arm_5 417 460 IPR000225 GO:0005515
Mal2g5100 827 SMART arm_5 637 677 IPR000225 GO:0005515
Mal2g5100 827 SMART arm_5 376 416 IPR000225 GO:0005515
Mal2g5100 827 SMART arm_5 709 749 IPR000225 GO:0005515
Mal2g5100 827 SMART arm_5 587 634 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5100 Mal-Chr2 120027440 120030624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5100 232 827 U-box Gene Family AT1G76390 27.718 5.07e-38 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5100 K08332 - gmx:100791453 1217.6