Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5075 ATGTACCCTCAACAACAACAATACCAAACACAACCCTACAATTTCCAGCAACAACAACAACACTACTATTCATCATTCCCTGATCCTTCACTTCTTCCTCCTGGCACTGACCCAGTTGCAAATTCAACAACTTTTTCACCTCATGCTCATCTTTACGCTTCCCAACCAACAGATTATCACAATTGGATCGGTCAACAATCTGAACCCATCAGATATGATCTTGCTGTTGCTTCATCATACGAGACTTCAGCAGTGCCTGCAAGTTTGCCTTCTACGTATGGTACATGGCCACCTCAAATTTATGGCAATGAGACTACAACAGTGTTGCCTAACCAAACCAAAGTTATCAAAGCTTTGAGATGCGAGGTGTGTAAAATTGATGTCAATGGCAAAGAATCTTATGAAAGTCACATAGCTGGAAAGAAACACAAGAAGAATTTGCAAGTACAGACTAATCCTACTATTGCATCTTATGCGATTGTACAAACTGACGTAAGTAGCATCCAAGGACAAGCGTTAATTGGTCCCGTAGTCAATCAATCAGAGCCTAAGAAACAGGCTGATTCTGCAACGGTTTGCTCAACTTGCAATGTTTTGTGCACTAGTCAAGATACATATATCAAACATGTTGCTGGGAGAAAGCACGCTGCTCAGGTTGCCTTGATGTCTAATAATGGCATTGGTCCATCTATTGCTGCATTCAAGCGTAATGGCGTTGCTCCTTTTCAAAAAGCTGCTAAGAAAATCAAGGTTGCTCAATCTGCATGGTGTGAAGTTTGCAAGATTAATTGCAACAGCAGGGATATCTACATTACACACTTAGCCGGTAAGAAGCACTTGAAGAACTTGGAGAAACTGTCAAATCCAAAAATCGATGTCGGCACCAGTGCCACTACCACCGCCACTGCATCAAATACTTTAATCGGGCCACAGGAAAAGCCAGATTCCGATAAACCAAAACCAAAGAAGGCATCAGAACTTGATATCGAGTCAAAGAAACGTAAAGTTGTAGAAGGAGGAGCTGCAGTTGATGGTATTAAAATGTGCACTTTATGCAATGTGGTGTGTAATAGCCAGACCGTTTTCAATTTTCACCTTAGTGGCCAGAAACATGCTGCTATGGTGAAGAAGGCAGGGTCAATCACTGGTTGA 1152 0.4184 MYPQQQQYQTQPYNFQQQQQHYYSSFPDPSLLPPGTDPVANSTTFSPHAHLYASQPTDYHNWIGQQSEPIRYDLAVASSYETSAVPASLPSTYGTWPPQIYGNETTTVLPNQTKVIKALRCEVCKIDVNGKESYESHIAGKKHKKNLQVQTNPTIASYAIVQTDVSSIQGQALIGPVVNQSEPKKQADSATVCSTCNVLCTSQDTYIKHVAGRKHAAQVALMSNNGIGPSIAAFKRNGVAPFQKAAKKIKVAQSAWCEVCKINCNSRDIYITHLAGKKHLKNLEKLSNPKIDVGTSATTTATASNTLIGPQEKPDSDKPKPKKASELDIESKKRKVVEGGAAVDGIKMCTLCNVVCNSQTVFNFHLSGQKHAAMVKKAGSITG* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5075 383 SUPERFAMILY beta-beta-alpha zinc fingers 93 149 IPR036236 -
Mal2g5075 383 Gene3D Classic Zinc Finger 241 286 - -
Mal2g5075 383 Gene3D Classic Zinc Finger 319 378 - -
Mal2g5075 383 Gene3D Classic Zinc Finger 104 150 - -
Mal2g5075 383 MobiDBLite consensus disorder prediction 313 329 - -
Mal2g5075 383 SUPERFAMILY beta-beta-alpha zinc fingers 181 221 IPR036236 -
Mal2g5075 383 Pfam Zinc-finger of C2H2 type 256 279 - -
Mal2g5075 383 Pfam Zinc-finger of C2H2 type 193 215 - -
Mal2g5075 383 Pfam Zinc-finger of C2H2 type 120 143 - -
Mal2g5075 383 Pfam Zinc-finger of C2H2 type 349 371 - -
Mal2g5075 383 Gene3D Classic Zinc Finger 177 227 - -
Mal2g5075 383 PANTHER ZINC FINGER RNA-BINDING PROTEIN 110 153 - -
Mal2g5075 383 MobiDBLite consensus disorder prediction 24 43 - -
Mal2g5075 383 PANTHER ZINC FINGER RNA-BINDING PROTEIN 144 379 - -
Mal2g5075 383 PANTHER SI:CH211-197H24.6 144 379 - -
Mal2g5075 383 SUPERFAMILY beta-beta-alpha zinc fingers 253 286 IPR036236 -
Mal2g5075 383 PANTHER SI:CH211-197H24.6 110 153 - -
Mal2g5075 383 MobiDBLite consensus disorder prediction 302 329 - -
Mal2g5075 383 SMART c2h2final6 347 371 IPR013087 -
Mal2g5075 383 SMART c2h2final6 191 215 IPR013087 -
Mal2g5075 383 SMART c2h2final6 119 143 IPR013087 -
Mal2g5075 383 SMART c2h2final6 255 279 IPR013087 -
Mal2g5075 383 SMART ZnF_U1_5 188 222 IPR003604 GO:0003676|GO:0008270
Mal2g5075 383 SMART ZnF_U1_5 344 378 IPR003604 GO:0003676|GO:0008270
Mal2g5075 383 SMART ZnF_U1_5 252 286 IPR003604 GO:0003676|GO:0008270
Mal2g5075 383 SMART ZnF_U1_5 116 150 IPR003604 GO:0003676|GO:0008270
Mal2g5075 383 SUPERFAMILY beta-beta-alpha zinc fingers 342 377 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5075 Mal-Chr2 118855065 118859264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5075 187 381 C2H2 Transcription Factor Family AT5G61190 30.256 1.27e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5075 - - cam:101495339 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal2g5075 2 118855065 118859264 Mal2g5075 2 118855065 118859264 ECH