Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5074 ATGGAAGAAGATCAAGAAGTGATTAAACATGTTTGCAAATTCTGCAGAAAGAGTTTTCCTTCTGGTAGATCATTAGGTGGTCACATGAGGTCTCATGATCATGATGATATTGATGATGATGATGAGTTTGTTGTTGCTGTAAGAACAACAATGAAGAAAGTAGAAGGTTGTTCTGAAGGGTATTATGGTCTTAGAGAGAATCCAAAGAAAACATGGAGAGTACTCACTGATGCAAGTGTTGATGAAGAGATTCAAGACTCTTTTGATGTTGTTTTGGATAAATTGTGTAAAGAATGTGGTAAAGGGTTTCAATCTATGAAAGCTTTGTTTGGTCACATGAAGTGTCATTCAGATAAAGAAAGAGTTTATAATCATAAGAAGAAGAATAATAGTTTTGAGTTGGATGATGAAGAAGATTCTAATGCAAGTGTTCTTCCAAAGAGAAAGAGAAGATCCAAAAGAAGTTTGAGAACAAGGTACATAAAGAGTAACACTTCATCTTCTGTTGTGAATTTTTGTGATAATTCTTTAGATTCATGTTCTGTTTCTGAGGAAGAAGAGGTTGCTATGAGTTTGGTTATGCTTAGTAGAGATGTAAGACCTTGGTATGGTATCAATTCTATTGCTGAATCTTATAATAATGATGATGATAAAAATTCTTTGGAATTGGAAGCTCCATTAACTCATTTAGTTTCTAAGATTGAAGGGAAAATGTTTATCACCAATAGTTCTGAAATTGTTAAAATGAACAAAAAAACAAAGAAGTTGGATTTTAGCAATATTGATTCTTCAAATCTCATGTCCAAAGGGAAAGGTTTAGAAATTTTTGATAGTGAGAGTGAAGAAAATGATGGATTGAAGATGAAGAAAACTAGAGTTCCTGTTATTGAGAATGGAAAGGATGAGAAGAAGGAAATGAAGGTTGAGCTTGATTCTGATTCAGCATTTGAGCTCAATGTGAGTTCAAAATCAGGTACATCAATGAAGGAAAAGTTTTTTGATTCTGAAACTAAGGTTACATCAGAAGGTGAATGCAGCAAGAGAAAATATCATAAGAGAAAATTTGAGTGTGCTACTTGCAACAAAATTTTTCAATCTTATCAAGCTCTTGGAGGTCATAGAGCTAGTCATAAGAGAACCAAAGGGTGTTCTGCTTCAAGAAATGAACAAGGTAGTGAAAATGGAAACAGTACTGAAATGGTAGAAAGTGAAAGAGTTGTGCTTAAGGAAGAAGTTTCTGAAATAAGGGATTTCCTTGATCTTAATCTTCCTGCTGCAAGTATTGATGATGAAAGATATGGTTTTTCTGAGATTTACAAACCATGGTGGTTAGTTGGAAGCAACCTCAAGCAAGAGACAATGATAGGTCTACTATCAAACTAG 1383 0.3377 MEEDQEVIKHVCKFCRKSFPSGRSLGGHMRSHDHDDIDDDDEFVVAVRTTMKKVEGCSEGYYGLRENPKKTWRVLTDASVDEEIQDSFDVVLDKLCKECGKGFQSMKALFGHMKCHSDKERVYNHKKKNNSFELDDEEDSNASVLPKRKRRSKRSLRTRYIKSNTSSSVVNFCDNSLDSCSVSEEEEVAMSLVMLSRDVRPWYGINSIAESYNNDDDKNSLELEAPLTHLVSKIEGKMFITNSSEIVKMNKKTKKLDFSNIDSSNLMSKGKGLEIFDSESEENDGLKMKKTRVPVIENGKDEKKEMKVELDSDSAFELNVSSKSGTSMKEKFFDSETKVTSEGECSKRKYHKRKFECATCNKIFQSYQALGGHRASHKRTKGCSASRNEQGSENGNSTEMVESERVVLKEEVSEIRDFLDLNLPAASIDDERYGFSEIYKPWWLVGSNLKQETMIGLLSN* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5074 460 SMART c2h2final6 355 377 IPR013087 -
Mal2g5074 460 SMART c2h2final6 10 32 IPR013087 -
Mal2g5074 460 SMART c2h2final6 94 116 IPR013087 -
Mal2g5074 460 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 401 460 - -
Mal2g5074 460 SUPERFAMILY beta-beta-alpha zinc fingers 9 35 IPR036236 -
Mal2g5074 460 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 1 398 - -
Mal2g5074 460 Pfam C2H2-type zinc finger 355 379 - -
Mal2g5074 460 Pfam C2H2-type zinc finger 10 32 - -
Mal2g5074 460 Pfam C2H2-type zinc finger 96 118 - -
Mal2g5074 460 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Mal2g5074 460 MobiDBLite consensus disorder prediction 385 401 - -
Mal2g5074 460 ProSitePatterns Zinc finger C2H2 type domain signature. 357 377 IPR013087 -
Mal2g5074 460 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 401 460 - -
Mal2g5074 460 SUPERFAMILY beta-beta-alpha zinc fingers 95 377 IPR036236 -
Mal2g5074 460 Gene3D Classic Zinc Finger 1 121 - -
Mal2g5074 460 ProSitePatterns Zinc finger C2H2 type domain signature. 12 34 IPR013087 -
Mal2g5074 460 ProSiteProfiles Zinc finger C2H2 type domain profile. 355 382 IPR013087 -
Mal2g5074 460 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
Mal2g5074 460 ProSiteProfiles Zinc finger C2H2 type domain profile. 10 37 IPR013087 -
Mal2g5074 460 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 398 - -
Mal2g5074 460 MobiDBLite consensus disorder prediction 375 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5074 Mal-Chr2 118850588 118851970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5074 9 251 C2H2 Transcription Factor Family AT1G26610 39.286 2.41e-31 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal2g5074 zf-C2H2_6 1.6e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5074 - - mtr:MTR_3g023760 623.239