Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5067 ATGGGAAGGTACAAACAAACACTTTTCGAACGAGTCGATTCTTGCAAATCAAAATTCTCAACCGCCGAAGAAATCGCCACTCATCTCCGTTCAACTTTCTCCGATTACCATTGGAAAACTAATCCACCACTCATTCACTTGGTTCGCAACGCTCTTCTTCTTTCTTCTTCCAATAACAACAACAATGAATATTCCCAAACTCCTTCAAAGAGACCTAAGATTCATGAATCTGAAAATGAATCTAAAGAAGAAAAAGAAGAAGATGATGTTGATGTTGATGCTAATGATGATGATGATGATGAAAGAATGCAAGATCTGGAACCATTGAGCATGAAAAGTTCCTCTGATTACAGTGACTCAGTGTCAGAGCAAGCGGTTAACAACTGCGGCGAGAATGTAGTGAAACGGACTACTTTTAGCTTAAAGGATTATTGGACCGGTGGTGATGGAAAGAAGAAAATGAAGGGGACTAGGTTTAAGGATTTAGTTGGAAATGAGATGAAGATTACTAAGGAATTGAAGAGAACCGTTAAGTTACTGCGTCAACCGGAATTGATTAGAGAGTATGGAATGAAACCTAAAAGAGGGATTTTGTTACATGGGCCATCTGGTTGTGGAAAGACTAGACTTGCTCATGCTATTGCTAATGAAGCTCAAGTTCCCTTTTATCCTATTTCAGCTGCTGATGTTGTTTCTGGTGTTTCTGGTAAGTGTGATGAAGCAATCAAAATGGTACAACCTTCGTTAACAAGAGAAGGATTCTCTCCCATTCCTGACGTTAAATGGGAAGATGTTGGTGCACTTGATCTTGTAAGAGAGGAGTTTGATCTCCACATTCTAAGGCGTATAAAATATCCCGAGGATTATGAGGGACTTGGGTTGGATTGTGACACGGGGTTTTTGCTTTACGGGCCTCCAGGATGTGGTAAAACACTGATTGCCAAATCTGTTGCCAATGAGGCAGGAGCTAATTTCATTTATATTAAGTGTCCTGAGCTTCTAAATAAATTTGTTGGAGAAAGCGAGCATGGTCTCCGGAGATTATTTGACCGTGCAAGGGCATGTGCACCATGTATACTTTTTTTTGAAGAGGTGGATGCTTTGACAACAAAACATGCTAATGAATGTATTGAAAGAGTATTGAAACAGTTGCTTATTGAGTTAGATGGCGCAGAGCAACGCAAAGGTGTTTTCGTGATTGGTGCAACAAATAGGCCTGAGGTGATGGATAGTACTCTCCTACGGCCGGGTAGATTTGGTAATCATATTTATATTCCTCTTCCAAGCCAAGATGACCGTGTTTCGATATTGAAAGCTCTTGCAAGGAGTAAGGAAACTCTTGCAAGGCGTAAGGAAACTCGTGAAAGGTTTAAGCTTAAGCCTATTGATGCCACTGTGGATTTGAGCGCCATTGCAAGAATGAAAGCTTGTGAAAACTTTAGTGGTGCTGATCTTGCTGCATTGATGGACAAAGCAATATTGGCTGCTCTCGAAGAGAAGCGGACCACAACCAAGAAGAAAAGTGATAACTTGACCATCAAGGTTAGACATTTTGAGGTAGCACTGAGCAAAGTATCTCCCTCTGTGTCGAAAAAGTATTATCAGCGCATTTCGAAGAGCATTAAAGCAGCATGA 1635 0.408 MGRYKQTLFERVDSCKSKFSTAEEIATHLRSTFSDYHWKTNPPLIHLVRNALLLSSSNNNNNEYSQTPSKRPKIHESENESKEEKEEDDVDVDANDDDDDERMQDLEPLSMKSSSDYSDSVSEQAVNNCGENVVKRTTFSLKDYWTGGDGKKKMKGTRFKDLVGNEMKITKELKRTVKLLRQPELIREYGMKPKRGILLHGPSGCGKTRLAHAIANEAQVPFYPISAADVVSGVSGKCDEAIKMVQPSLTREGFSPIPDVKWEDVGALDLVREEFDLHILRRIKYPEDYEGLGLDCDTGFLLYGPPGCGKTLIAKSVANEAGANFIYIKCPELLNKFVGESEHGLRRLFDRARACAPCILFFEEVDALTTKHANECIERVLKQLLIELDGAEQRKGVFVIGATNRPEVMDSTLLRPGRFGNHIYIPLPSQDDRVSILKALARSKETLARRKETRERFKLKPIDATVDLSAIARMKACENFSGADLAALMDKAILAALEEKRTTTKKKSDNLTIKVRHFEVALSKVSPSVSKKYYQRISKSIKAA* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5067 544 Pfam AAA+ lid domain 466 505 IPR041569 -
Mal2g5067 544 Gene3D - 147 249 IPR027417 -
Mal2g5067 544 SMART AAA_5 193 290 IPR003593 -
Mal2g5067 544 SMART AAA_5 296 429 IPR003593 -
Mal2g5067 544 MobiDBLite consensus disorder prediction 82 104 - -
Mal2g5067 544 MobiDBLite consensus disorder prediction 108 124 - -
Mal2g5067 544 PANTHER AAA-FAMILY ATPASE 24 242 - -
Mal2g5067 544 PANTHER AAA-FAMILY ATPASE 240 537 - -
Mal2g5067 544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 258 536 IPR027417 -
Mal2g5067 544 Coils Coil 374 394 - -
Mal2g5067 544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 241 IPR027417 -
Mal2g5067 544 CDD AAA 299 427 - -
Mal2g5067 544 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 240 537 - -
Mal2g5067 544 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 24 242 - -
Mal2g5067 544 Gene3D - 250 427 IPR027417 -
Mal2g5067 544 MobiDBLite consensus disorder prediction 57 124 - -
Mal2g5067 544 Coils Coil 494 514 - -
Mal2g5067 544 Gene3D - 428 533 - -
Mal2g5067 544 Pfam ATPase family associated with various cellular activities (AAA) 197 245 IPR003959 GO:0005524|GO:0016887
Mal2g5067 544 Pfam ATPase family associated with various cellular activities (AAA) 301 427 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5067 Mal-Chr2 118597214 118601448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5067 245 528 Calmodulin-binding Proteins AT3G56690 38.062 3.06e-56 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5067 K14571 - qsu:112005427 393.66