Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5053 ATGTCTAGGTCTCTACAAAAAACCCTTGACCGTCGTATCGAATCATGCAAATCAAAATTCTACACGGCCAATCAAATCGTCAATCATCTCCGGTCAACCTACCCCTCCGATTACCTAAGTTTACAGCTTGATGCACTCCTTCCCTCCGTTCTCAAAGCTCTCACAGATTCTCAAAAGAAACCTAGCTTTGTTGATTCTGACGATGATGATGCTGGTAATTACGAAACAACTAGAAATGATGAACTAAGGAGCACAAAAACTTCATCTGATTATTCTTCTCGAAAGAGACAGAAGATTGATGAATCTGATTTTGATGATGATGATGATCATGAAAACAATCGAACTTCATCTGATTATTCTTCTCGAAAGATACAAAAGATTGATGAATCTGATTCGGATGATGATGATCATAAAAGCATGCGAAGTTCATTTGATCATGCTTCTCGAAAGACACACATGAGTGATGATTCTGATTCTGATTCTGAAGATGATGATCGTGAAAGTATGAAAAATGATAAATTAATGAGTCCGCTAACCTCCTCTGATGATGATGATTTCGAGAACGGCGATTACATGGAGAAAGCAGTGGAACCGGTCTCTAATGCACGTATCGGCGGCAGTGGTGATGGTAAGAAGGGGCCGATGTTTAAGGATTTAGCAGGGAATATGATGGAGAAGATAAAAAATGAATTGGATGGGGATCTTAATTTACTGTGTAACCCTGAGTTGTGTAAAGAGTTAGGTTGGAAACCATTGCCGGGAATTTTGTTGCATGGACCACCTGGTTGTGGGAAAACTAGGCTTGCTCATGCTATTGCTAATGAAACTGAACTTCCTTTTTATCCAATTTCTGCTACTGATGTTGTTTCTGGAGTCACTGGTGGATCTGAAGAAAATATTAGAGAGCTTTTCTCTAAAGCAAAAAGGACTGCTCCGTCAATTATCTTTATCGATGAGATTGATGCAATTGCTTCGAAAAGAGAGAATTTACAGCAACAGATGGAGACACGACTTGTGACGCAATTACTAACTAGCATGGAAGAAGCTTGTAATTCAGTGAGTTCCGATGAACCTACTGGTTATGTTCTTGTAATTGGAGCGACAAATAGGCTCGATGCTATTGATCATGCTTTGAGAAGGCCTGGTCGTTTTGGTCGTGAGATTCTTGTTGGCATTCCCGATGAATCTGCCAGGGAGGAGATCCTTTTCGTGCATACTCGAAGTTGTAGGGACAAGTTTGACGGTTCGGTTGATCTGAAAAAGATAGCCAGGTCTACTCCGGGATTTGTTGGCGCTGATTTGGAAGCTCTGGTCGGAAAAGCTGGCGAGCTAGCATTGGAAAGGGTAATTAATGAAAGGAAACGCGAATCATCTAAAGATCTCATGAGTGAACCTAATATAGTCAGATGGAAGAGAACTTGGTCACCTCAAGAAATAAATAAATTTGCAATCAAAATGTCTGATTTTGAGGAAGCAGCCAAAACCGTGCAACCTTCATTGACAAGAGAAGGATTCTCTCCCATTCCTGATGTTAAATGGGAAGATGTTGGTGCGCTTGATGTTGCAAGAAAAGCTTTTAAGTCGCATATTCTAAGCCGTATAAAAACACCTGAGAATTATGAGGGACTTGGGTTGGATCGTGACGCGGGATTTTTGCTTTACGGGCCTCCAGGTTGTGGTAAAACACTGATTGCCAAAGCTCTTGCCAATGAGGCAGGAGCTAATTTCATTTATATTAAGGGTCCTGAGCTTCTAAATAAATATGTTGGAGAAAGCGAGCGTGAAGTCCGGAAATTATTTGATCGCGCAAGGGCATGTTCACCATGTATACTTTTCTTTGACGAGGTAGATGCTTTGACAACAAAACATGCTAATGAAGGTGGCAAGGTTATTGACGGAGTATTGAGCCAGTTGCTTATTGAGTTAGATGGCGCAGAGCAACGCAAAGGTGTTTTCGTGATTGGTGCAACAAATAGGCCTCTGGATATGGACGAAGCTGTCCTACGGCCGAGTAGGTTTGGTAATCGTATTTATATTCCTCTTCCTAGCCCAGACGACCGTGTTTCGATATTGAAAGCTCTTGCAAGGAGTAAGGACGCTCTTTCAAGGTGTAAGAAAACTCATGCAAGGTTTAAGCTTATGCCTATTGATGCCAGTGTGGATTTGGACTTAATTGCAAGATTGAAAGCTTGTGAAAACTTTAGTGGTGCTGATCTTGCTGCATTGATGGACAAAGCAATATTGGCTGCTCTCAAAGAGAAGCTGGCAGAAACCGAGAGAACAAGTGATACATTGATCGTCAAGACAAGACATTTTGCGGTAGCACTGATTAAAGTCTCTCCATCTGTGTCAAAAAAGCAAAGGGAGTACTATGAGAGTGTTTCAGAGAAGCTTAAAGAAAGAGATTCTAAATCAAAGAGGAAAAGGTGA 2430 0.4123 MSRSLQKTLDRRIESCKSKFYTANQIVNHLRSTYPSDYLSLQLDALLPSVLKALTDSQKKPSFVDSDDDDAGNYETTRNDELRSTKTSSDYSSRKRQKIDESDFDDDDDHENNRTSSDYSSRKIQKIDESDSDDDDHKSMRSSFDHASRKTHMSDDSDSDSEDDDRESMKNDKLMSPLTSSDDDDFENGDYMEKAVEPVSNARIGGSGDGKKGPMFKDLAGNMMEKIKNELDGDLNLLCNPELCKELGWKPLPGILLHGPPGCGKTRLAHAIANETELPFYPISATDVVSGVTGGSEENIRELFSKAKRTAPSIIFIDEIDAIASKRENLQQQMETRLVTQLLTSMEEACNSVSSDEPTGYVLVIGATNRLDAIDHALRRPGRFGREILVGIPDESAREEILFVHTRSCRDKFDGSVDLKKIARSTPGFVGADLEALVGKAGELALERVINERKRESSKDLMSEPNIVRWKRTWSPQEINKFAIKMSDFEEAAKTVQPSLTREGFSPIPDVKWEDVGALDVARKAFKSHILSRIKTPENYEGLGLDRDAGFLLYGPPGCGKTLIAKALANEAGANFIYIKGPELLNKYVGESEREVRKLFDRARACSPCILFFDEVDALTTKHANEGGKVIDGVLSQLLIELDGAEQRKGVFVIGATNRPLDMDEAVLRPSRFGNRIYIPLPSPDDRVSILKALARSKDALSRCKKTHARFKLMPIDASVDLDLIARLKACENFSGADLAALMDKAILAALKEKLAETERTSDTLIVKTRHFAVALIKVSPSVSKKQREYYESVSEKLKERDSKSKRKR* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5053 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 509 797 IPR027417 -
Mal2g5053 809 MobiDBLite consensus disorder prediction 164 180 - -
Mal2g5053 809 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 74 797 - -
Mal2g5053 809 ProSitePatterns AAA-protein family signature. 362 380 IPR003960 GO:0005524|GO:0016887
Mal2g5053 809 MobiDBLite consensus disorder prediction 782 809 - -
Mal2g5053 809 SMART AAA_5 547 683 IPR003593 -
Mal2g5053 809 SMART AAA_5 251 394 IPR003593 -
Mal2g5053 809 MobiDBLite consensus disorder prediction 61 157 - -
Mal2g5053 809 Coils Coil 748 768 - -
Mal2g5053 809 Gene3D - 209 391 IPR027417 -
Mal2g5053 809 MobiDBLite consensus disorder prediction 56 189 - -
Mal2g5053 809 PANTHER AAA-FAMILY ATPASE 74 797 - -
Mal2g5053 809 Pfam AAA+ lid domain 416 452 IPR041569 -
Mal2g5053 809 Pfam AAA+ lid domain 719 757 IPR041569 -
Mal2g5053 809 Gene3D - 682 777 - -
Mal2g5053 809 Gene3D - 393 503 - -
Mal2g5053 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 493 IPR027417 -
Mal2g5053 809 CDD AAA 545 681 - -
Mal2g5053 809 Gene3D - 509 792 IPR027417 -
Mal2g5053 809 CDD AAA 250 391 - -
Mal2g5053 809 Pfam ATPase family associated with various cellular activities (AAA) 552 681 IPR003959 GO:0005524|GO:0016887
Mal2g5053 809 Pfam ATPase family associated with various cellular activities (AAA) 255 390 IPR003959 GO:0005524|GO:0016887
Mal2g5053 809 ProSitePatterns AAA-protein family signature. 651 669 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5053 Mal-Chr2 117936395 117941716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5053 480 799 Calmodulin-binding Proteins AT3G56690 37.423 1.54e-58 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5053 K14571 - gmx:100809594 776.163