Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5029 ATGGAGCAGCAACAACAACATCATACAACAAGTGTAGACAACAATTCAGTTATGACTCAAGATGCAATTGATCTAAATCTTCGTCTTTCTTATCGCATTATACGCAGACACTTCTTCCTAACAAGAAGAAGGTTTAGATTAAATTACATTCAACCAACAACGACTACTCAGAATGGCTTACCTGTTTATGTTGATGGCCACTATGTTTTTCATGTAAACAACATCAACCACATCAATGAGGTTCAAGCTATAAGAAGAAATATTGAAACAACTCAAGGACATTTTCATCGCAATCTTCAAAGAATCAAAATTGAAGAAGGAAATGAGTATGAAGTTTTGAGGTGTTCCATTTGTTTGGCAAAGCTTTCGTTTGGAACAAAAGCAATTCGGTTGTCATGTTCGCATATCTATCACGAACAATGCATTGTGAAATGGCTAGATAGATCAAACACATGCCCTTTATGCCGTCAGATCATTTCGGATGTTTCCTCATGA 495 0.3616 MEQQQQHHTTSVDNNSVMTQDAIDLNLRLSYRIIRRHFFLTRRRFRLNYIQPTTTTQNGLPVYVDGHYVFHVNNINHINEVQAIRRNIETTQGHFHRNLQRIKIEEGNEYEVLRCSICLAKLSFGTKAIRLSCSHIYHEQCIVKWLDRSNTCPLCRQIISDVSS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5029 164 SUPERFAMILY RING/U-box 98 160 - -
Mal2g5029 164 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 24 157 - -
Mal2g5029 164 SMART ring_2 115 155 IPR001841 -
Mal2g5029 164 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 24 157 - -
Mal2g5029 164 Pfam Ring finger domain 114 156 IPR001841 -
Mal2g5029 164 ProSiteProfiles Zinc finger RING-type profile. 115 156 IPR001841 -
Mal2g5029 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 161 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5029 Mal-Chr2 117081073 117081567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5029 99 161 C3H Transcription Factor Family AT4G12190 47.059 3.75e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5029 - K22378 cam:101490108 88.5817