Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal2g5019 ATGATAAATGTAGAAAGTGATTCCGTAATGATTCTAGATGCTGTTGATCTAAATCAGCACGCTCCTCTTCGTCACACTATCGGTAGAAACCCGTCAACAAGGTTCCCTCTCTTGCGTTCTTATGTTATTCGCCACCATAACCACATCAACAGGGTTCGGACTAGTACAAGAAATATTGAAACTACTCGAAGGCATTCTTATCGCAATCTTTCAAGAATTAGAGTTGGAGAAGGAAGGATGGAGTTAGAAGCTATGATGTGTTCTGTCTGCCTTGTGGAGCTTTCCGTTGGGTCGAAAGCAATTCAGTTGCAATGTTTGCATTCCTATCACGAAGAGTGTATCATGAAATGGTTAGATAGATCAAACACATGTCCTCTGTGTCGTAGGGTTGTTTCGTGA 399 0.416 MINVESDSVMILDAVDLNQHAPLRHTIGRNPSTRFPLLRSYVIRHHNHINRVRTSTRNIETTRRHSYRNLSRIRVGEGRMELEAMMCSVCLVELSVGSKAIQLQCLHSYHEECIMKWLDRSNTCPLCRRVVS* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal2g5019 132 PANTHER SI:CH211-59O9.10 58 131 - -
Mal2g5019 132 SUPERFAMILY RING/U-box 80 131 - -
Mal2g5019 132 Pfam Ring finger domain 86 128 IPR001841 -
Mal2g5019 132 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 132 IPR013083 -
Mal2g5019 132 ProSiteProfiles Zinc finger RING-type profile. 87 128 IPR001841 -
Mal2g5019 132 SMART ring_2 87 127 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal2g5019 Mal-Chr2 116572487 116572885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal2g5019 69 128 C3H Transcription Factor Family AT1G14200 40.000 2.05e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal2g5019 - K22378 mtr:MTR_3g025620 88.1965