LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal2g5011	ATGGCACTACCTTCTTTAGCTTCCTTCACATGTGATTGGACTTATGATGTCTTTCTCAGTTTTAGAGGCATTGATACTAGAAACAACTTCACTGGTAATCTCTACAATTCTCTTCAGCATCAAAGAGGTATAAAAACTTTCATGGATGATGAAGAACTTAAAAAAGGAGAGCAAATCACAGCCACTCTTCTTCAAGCTATCAATGAATCTAGGATTTTCTTTGCTGTTTTCTCCACTAACTACGCATCTTCAACTTTCTGTTTGACTGAACTTGTTACCATCCTTGAGTGTTCAAAGTCACAAGGAAGGTTGTTTTTGCCGATTTTTTATGATGTTGATCCATCCCAGATTCGATACCTAACCGGGGCTTATGCTGAGGCTTTTGTAAAACATGAGAAGAGGTTCAAAGATGACAAAGATAAGGTGCAGAAATGGAGGAATGCTTTACATCAAGCTGCTAGTATGTCTGGATGGCATTTTAAACCAGGGTCTGAATCAGAATATAAGTTTATTGGAAAAATAGTTGAAGAGGTCTCTATAAAGATCAACCGCGTTCATCTGCATATTGCAAACAACCCAGTTGGGTTGGAGTCTCGAATGTTAGAACTGACATCTCTCCTCAGACTTGAGTCTGATGAGAGAGTCAACATGGTAGGCATTTATGGAATCGGCGGAATAGGCAAATCAACAACTGCTCGTGCTTTGCATAACTTGATTGCTGACCAATTTGAAAGTGTGTGTTTTCTTTCTGGCATAAGAGAGAGGACAATTAATCAAGGCCTTGCAAATCTCCAAGAAACTCTACTGTCTGAAACACTTGGGGAGAAAGATATTAAAGTGGGAGATGTTTACAGAGGAATTTCAATAATTAAAAGGAGGCTTCAAAGAAAGAAAGTCCTCTTGATTCTTGATAATGTTGACAAAGTGGAGCAGTTACAGGCACTTGTAGGAGGACATGATTGGTTTGGATTTGGCAGCAGGATCATAATCACTACAAGAGACAAGCATTTGCTGGCCACTCATGGGATTGTGAAATTATATGAGGTTAAACAACTATCAAATGAAAAGGCTCTCACTATGTTTCGGTCACATGCATTTAAAAATCAACAAATTGATCCAGGTTACATGGATATTGCAAAACGTGCAGTTTCGTATTGCCATGGTCTTCCCTTGGCTTTGGAGGTGATAGGTTCTCACTTGTTTGGAAAAAGTTTAGATGTATGGAGATCTTCATTGGATAAATATGAAAAAGTCCCTCGTAAAGACATCCATGATATTCTTAAGGTTAGCTATGATGACTTGGAAGAAGATGAGAAGGGTATTTTTCTAGACATAGCTTGTTTCTTCAATTCTTACGAAATAGGTTATGTCAAAGAAATATTATACTTACATGGTTTTCATGCGGACGATGGTATACAAGTGCTAACTGACAAATCACTCATGAAAATTGATGTCTGTGGTTTTGTGAGGATGCATGACTTGATTCAAGACATGGGTAGAGAAATCGTGAGGCAGGAATCAAGGTTGGAGCCTGGAAGGCGCAGTAGATTATGGTTTAGTGATGACATTGTTCATGTTTTGGAAGAAAACAAGGGAACTGGTACAGTTGAAGTCATAATCGCTGATTTGCACAAAGATAGAAAAGTGAAATGGTGTGGAAAAGCCTTCCGGAAGATGAAGAACTTAAGAATTCTTATAATTAGAAATGCACGATTTTCCATAGGTCCGCAAATTCTTCCAAATAGTTTGAGAGTGCTTGATTGGAGTGGATATCAATCATCCTCCTTACCATCTGATTTTAATCCCAAGAATCTTGTCATACTTAGCCTGCCTGAAAGTTGCCTTAAACGGTTCAAACCACTCAAGGTTTTTGAGATGTTGAACTTTCTGGATTTTGAAGGCTGCAAATTCCTAACTGAAATGCCTAGCTTATCTAGAGTACCAAATTTGGGGGCACTATGTCTTGATTACTGCACCAATTTAATTACAATCCATAACTCAATTGGGTTTCTTGACAGGCTTGTCTTATTGAGTGCTCAAGGATGCACCCAACTAGAAAGTTTGGTTCCTTGCATCAACTTGTCATCTCTAGAGACTTTAGATCTAAGAGGTTGCTCACGTCTTGAGAGCTTCCCAGAAGTTTTAGGAGTGATGGAGAATATAAAAGATGTTTATTTAGACCAGACTGCCCTAAAACAACTGCCTTTTACATTTGGAAATATGGTTGGGCTACGACGTTTGTTCTTGAGGGGATGCCGAGGGATGATTCAGCTACCAAGCTCCATATTGCCCAAATTTGAGATAATAACATCTTATGGTTGTAGAGGATTTCGATCATCTGAAGATGAAGGAAAAGTTAATCCAAAAGTGTTTGCAAATGCCATGTGTGTTTATAATGAGTATGGACAGTCCTACGTTAATGTGTATGCTCGTTACATAACCTCTATCGATATCATAGAAATATGCAGTCCTGAGTCTGAATTCTATGACATCAATCTTTCAGGGAGGAACATAAGTTTGGGTAAGCATATTGTTAATACATCATCAATGTGTTTCTGGTTCCGAAAAAAATTCCCCAAGATAGCTCTATGGTGTAGTGTAAAACCTGAAAAGCATTTGGACAACATGGTGGTGGATTTCAAGTTCACTGTACTCATTAATGGCACTAAGCAACTCATTGCTTCATGTGAATACATATTTTATACAGAAAACAAGCCGGACCAAGTTTTTTGTTGTGATCTACAATACAAGGAGGAGGGTGTATTTTCAGAAAATGAGTGGAATCATGTAGAGATTTTATGTGAAATTGAAGATCTCATGCCTGGTGATTCTAAAAGGGTTACGGCCAACCAGAACTGGACTATAAAGTGGTCTTTCATATATGTCTACTTTGGAAATGATTGTGATTACAACTTAATTGGCAATCCTGATTCTCGTATGTTTATTGAACAAAAATTTCAAGATATGCAGATAATATAG	2979	0.3797	MALPSLASFTCDWTYDVFLSFRGIDTRNNFTGNLYNSLQHQRGIKTFMDDEELKKGEQITATLLQAINESRIFFAVFSTNYASSTFCLTELVTILECSKSQGRLFLPIFYDVDPSQIRYLTGAYAEAFVKHEKRFKDDKDKVQKWRNALHQAASMSGWHFKPGSESEYKFIGKIVEEVSIKINRVHLHIANNPVGLESRMLELTSLLRLESDERVNMVGIYGIGGIGKSTTARALHNLIADQFESVCFLSGIRERTINQGLANLQETLLSETLGEKDIKVGDVYRGISIIKRRLQRKKVLLILDNVDKVEQLQALVGGHDWFGFGSRIIITTRDKHLLATHGIVKLYEVKQLSNEKALTMFRSHAFKNQQIDPGYMDIAKRAVSYCHGLPLALEVIGSHLFGKSLDVWRSSLDKYEKVPRKDIHDILKVSYDDLEEDEKGIFLDIACFFNSYEIGYVKEILYLHGFHADDGIQVLTDKSLMKIDVCGFVRMHDLIQDMGREIVRQESRLEPGRRSRLWFSDDIVHVLEENKGTGTVEVIIADLHKDRKVKWCGKAFRKMKNLRILIIRNARFSIGPQILPNSLRVLDWSGYQSSSLPSDFNPKNLVILSLPESCLKRFKPLKVFEMLNFLDFEGCKFLTEMPSLSRVPNLGALCLDYCTNLITIHNSIGFLDRLVLLSAQGCTQLESLVPCINLSSLETLDLRGCSRLESFPEVLGVMENIKDVYLDQTALKQLPFTFGNMVGLRRLFLRGCRGMIQLPSSILPKFEIITSYGCRGFRSSEDEGKVNPKVFANAMCVYNEYGQSYVNVYARYITSIDIIEICSPESEFYDINLSGRNISLGKHIVNTSSMCFWFRKKFPKIALWCSVKPEKHLDNMVVDFKFTVLINGTKQLIASCEYIFYTENKPDQVFCCDLQYKEEGVFSENEWNHVEILCEIEDLMPGDSKRVTANQNWTIKWSFIYVYFGNDCDYNLIGNPDSRMFIEQKFQDMQII*	993

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal2g5011	992	SUPERFAMILY	L domain-like	540	779	-	-
	Mal2g5011	992	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	181	445	IPR027417	-
	Mal2g5011	992	ProSiteProfiles	TIR domain profile.	13	182	IPR000157	GO:0007165
	Mal2g5011	992	SUPERFAMILY	Toll/Interleukin receptor TIR domain	9	158	IPR035897	-
	Mal2g5011	992	Gene3D	-	181	344	IPR027417	-
	Mal2g5011	992	Gene3D	Ribonuclease Inhibitor	536	783	IPR032675	-
	Mal2g5011	992	PRINTS	Disease resistance protein signature	217	232	-	-
	Mal2g5011	992	PRINTS	Disease resistance protein signature	293	307	-	-
	Mal2g5011	992	PRINTS	Disease resistance protein signature	692	708	-	-
	Mal2g5011	992	PRINTS	Disease resistance protein signature	386	400	-	-
	Mal2g5011	992	Gene3D	-	351	435	IPR042197	-
	Mal2g5011	992	Pfam	TIR domain	15	180	IPR000157	GO:0007165
	Mal2g5011	992	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	9	713	-	-
	Mal2g5011	992	Pfam	NB-ARC domain	210	433	IPR002182	GO:0043531
	Mal2g5011	992	SUPERFAMILY	"Winged helix" DNA-binding domain	422	528	IPR036390	-
	Mal2g5011	992	SMART	AAA_5	214	352	IPR003593	-
	Mal2g5011	992	SMART	till_3	14	155	IPR000157	GO:0007165
	Mal2g5011	992	Gene3D	-	10	180	IPR035897	-
	Mal2g5011	992	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	9	713	IPR044974	GO:0006952

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal2g5011	Mal-Chr2	115919673	115923706	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal2g5011	9	774	WRKY Transcription Factor Family	AT4G12020	32.576	5.81e-95	329

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal2g5011	-		-	mtr:MTR_3g020650	1523.84